| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1161 |
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| Symbol | |
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| ID | 3673233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1215819 |
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| End bp | 1216589 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709845 |
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| Product | RNA methyltransferase TrmH, group 1 |
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| Protein accession | YP_314919 |
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| Protein GI | 74317179 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000875813 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGA GCGATCCTAA ACTTCTCGCC GACATTCGCG TGGTGCTCGC GCGCACGAGT
CACCCAGGCA ACATCGGCGC CGCGGCACGC GCGATGAAGA CGATGGGATT GTCGCAACTG
GTTCTGGTTG ATCCCGCGGT ATTTCCCAAC AGCCAGGCCG ACGCGATGGC CTCGGGCGCC
GTCGACGTGC TTGCCGGCGC ACGCGTTTGC CCGACCCTGA CCGAAGCCCT CGCCGACACC
ACGCTCGCGC TCGGCGTCTC GGCGCGCCGA CGCGACATCG TCGCCGAGGT GCTGAATCCC
GCGGAGGCAG CGCTTCGGCT GCTCGGCGAG GCGCAGCGCG CGCCCGTCGC GCTGGTGTTC
GGCAACGAGA CCAGCGGACT GTCGAACGAG GAGCTGAGTC TGTGCCAAGG GCTCGTGACG
ATCCCGGCCA ACCCCGACTA CAGTTCCCTC AACCTCGCCG CAGCGGTCCA GGTGCTGAGC
TACGAGATCC GCCAGGCCTG GCTCGACCGT CCGTCCTGGC CGGCGCCCGA GATCGACGCC
GCGAGCGGAG ACGAAGTCGA GAAGTTCTAC GGCCATCTCG AGGCCGCGCT CGCCGACCTC
GAATTCCTCA ATCCCGGCTC GCCGGGCAAG CTCATGCTCA AGCTCCGGCG CCTGTTCGCA
CGCACCCGCC TGGCGAAGGA GGAAGTCAAC ATCCTGCGCG GCATCCTCAG CGCGGCGCAG
GACGCCAAGC GGGCCGCGCG CCGCAGCGGA ACCGTCGGGC ATAATAGTTG A
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| Protein sequence | MTSSDPKLLA DIRVVLARTS HPGNIGAAAR AMKTMGLSQL VLVDPAVFPN SQADAMASGA
VDVLAGARVC PTLTEALADT TLALGVSARR RDIVAEVLNP AEAALRLLGE AQRAPVALVF
GNETSGLSNE ELSLCQGLVT IPANPDYSSL NLAAAVQVLS YEIRQAWLDR PSWPAPEIDA
ASGDEVEKFY GHLEAALADL EFLNPGSPGK LMLKLRRLFA RTRLAKEEVN ILRGILSAAQ
DAKRAARRSG TVGHNS
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