Gene Tbd_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1100 
Symbol 
ID3673171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1159353 
End bp1160111 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content70% 
IMG OID637709783 
Producthypothetical protein 
Protein accessionYP_314858 
Protein GI74317118 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.947825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.67239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTCG CGAGTCTCGG TAGCGGGAGC GAAGGCAACG GCCTCGTCGT CGAGGCGGGC 
GCGACCCGGG TGCTCATGGA TTGCGGCTTC GGGCTGGCGG AAAGCACCGT GCGTCTGGCG
CGGCTCGGCC TCAAACCGGG CGACCTCGCG GCGATCGTCG TCACGCACGA GCACAGCGAC
CATATCGGCG GGGTCGGCCG GCTGGCGCGC AAGTACAAGC TGCCGGTGCG GCTGACCGCC
GGGACGCTGG CCATGGCGAA CGATCTCGCC GGCGTCACGG TCGAGGTGAT CGACAGCCAC
GCGGCGTTCG CGCTGGACGA TCTCGAAATC CAGCCGTTTC CGGTGCCGCA CGACGCGCGC
GAACCGGTGC AATTCGTGTT CGGCGACGGC CAGCGCAGGC TCGGCGTGCT CACCGACGCC
GGCTGCGGCA CGCCCCATAT CGAGGCGACG CTGGCGGGCG TCGACGCGCT CGTGCTCGAA
TGCAATCACG ACGCCGTCAT GCTGGAAAAC GGGCCCTATC CGGCGAGTCT CAAGCGTCGC
GTCGGCGGCC GCTTCGGCCA CCTCGAGAAC GGCCAGTCGG CGGCGCTGCT CGGCAAACTC
AAGCACGAGC GGCTGCGCTG TGTGGTCGCC GCGCACGTGT CGAAGCGGAA CAACACGGCG
GCGCTCGCGC GGCGGGCGCT GGCACAGGTG CTCGACTGTG CCGACGACGA GGTGCGGGTG
GCCTGTCAGA CGGCGGGCTT TGACTGGATC AGTGTTTAA
 
Protein sequence
MRFASLGSGS EGNGLVVEAG ATRVLMDCGF GLAESTVRLA RLGLKPGDLA AIVVTHEHSD 
HIGGVGRLAR KYKLPVRLTA GTLAMANDLA GVTVEVIDSH AAFALDDLEI QPFPVPHDAR
EPVQFVFGDG QRRLGVLTDA GCGTPHIEAT LAGVDALVLE CNHDAVMLEN GPYPASLKRR
VGGRFGHLEN GQSAALLGKL KHERLRCVVA AHVSKRNNTA ALARRALAQV LDCADDEVRV
ACQTAGFDWI SV