| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1098 |
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| Symbol | dapA |
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| ID | 3673169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1157283 |
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| End bp | 1158173 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637709781 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_314856 |
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| Protein GI | 74317116 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.429598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.674716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAA TAAGCACGGC CAGAGGAAGC CTGGTCGCGA TCGTGACCCC GATGTCGGAT
GACGGCGCGC TCGATCTGGG CGCGTTGCGC CGTCTGATCG ACTGGCACAT CGAACAGGGA
ACTGACGGCA TCGTCATCGT CGGCACGACC GGCGAGTCGC CGACGGTCAA CTTCGACGAG
CACTGTCTGC TGATCCGCAC CGCGGTCGAA CAGGCGGGTG GACGCGTGCC GGTCATCGCA
GGTACCGGTG CCAATTCGAC CAGCGAGGCG ATCGCGCTCA CCGAATGCGC GCGCGCGGCC
GGTGCCCAGG CGGGCCTCTC GGTCGTGCCC TACTACAACA AGCCGACGCA GGAAGGGCTC
TACCAGCACT ACCGCAAGAT CGCCGAAGCG GTCGACCTGC CGCTCATCCT TTACAACGTG
CCCGGGCGGA CGGTGGCCGA TCTCGCCAAC GACACGGCGG TGCGCCTCGC GGAAGTGCCC
GGCATCGTCG GCCTCAAGGA CGCGACTGGC AACATGGAAC GCGCGGCCGA TCTGGTGCGT
CGGGTGCCGA AGGGTTTTGC TCTCTACAGC GGCGACGACG CGTCGGCGTT GCCGTTCATG
TTGCTCGGCG GACACGGCGT GATCTCGGTC ACGGCGAACG TCGCGCCTCG GTTGATGCAC
GAAATGTGCG TCGCGGCCTT CGAAGGGAAT CTCGCGCGTG CGCGCGAATG CAACGACGCG
CTGTTGCCGC TGCATAGCAA GCTTTTCGTC GAAGCCAATC CGATTCCGGT CAAGTGGGCG
TGCGCCGAAC TTGGCCTGAT TCCCCCGGGC CTGCGCCTGC CGCTGACGCC GCTGTCTGGC
GGACAGCACG AAGTCGTGCG CGCCGCAATG CGCCACGCCG AATTGATCTA G
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| Protein sequence | MAEISTARGS LVAIVTPMSD DGALDLGALR RLIDWHIEQG TDGIVIVGTT GESPTVNFDE
HCLLIRTAVE QAGGRVPVIA GTGANSTSEA IALTECARAA GAQAGLSVVP YYNKPTQEGL
YQHYRKIAEA VDLPLILYNV PGRTVADLAN DTAVRLAEVP GIVGLKDATG NMERAADLVR
RVPKGFALYS GDDASALPFM LLGGHGVISV TANVAPRLMH EMCVAAFEGN LARARECNDA
LLPLHSKLFV EANPIPVKWA CAELGLIPPG LRLPLTPLSG GQHEVVRAAM RHAELI
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