| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1039 |
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| Symbol | |
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| ID | 3671264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1102188 |
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| End bp | 1103369 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637709722 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_314797 |
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| Protein GI | 74317057 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0950507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.205042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGC GCGCGATCCG CTGGGACGAA GCGCTGCCGG AGGCCGCCGG CGTCACGCCG
CTCCTGCTTC TCGACATGTC GGGCTCGCCA CGACCCGAGT GGACGGCGCG CCTTCAGAAG
CTGCGCCAGC GCTTTCCGAC CGGCCAGCTC ATTTGCCTCG AAGTCGGCTC CGACTTCGAC
CAGTTGCAGC AGGCCCTGCG CGGCGGCTGC GACAGTTGCC TGCTCGAGGG GACGCCTTCG
CACGCCATCG TCGAGCATAT CCTCGAACTG AACGAGCGGC AGGAGCAGGA AACCTTCCGC
GTGCTGATCG TGGAGGACTC GAAGACCGCG AGCCACATGA TCCAGCGCAC GCTGGCCGAG
AGCCAGATCG CGTCGGAGAT CGTCAACGAC CCGCGCCAGA CCTTGAACGC TCTGAAGCAG
TTCAACCCCG ACCTGATCCT GATGGACATG TACATGCCGG ATTGCACCGG CGTCGAGGTC
GCGCGCATCA TCCGTCAGCA CGACGAGTTT CTCGGCATGC CCATCGTCTA CCTCTCGGGC
GAGACGAACG TCGCGCTGCA GGTCGACGCG ATGCGCCTCG GCGGCGATCA CTTCCTCACC
AAGCCGTTCA ACCCGGTTTT CCTCAACACG ATAGTCAAGA GCAAGATCGA GCGCTATCGC
GCCTTGCGCC GTTCGATGTA CCACGACAGC CTGACCGGCC TGCTCAACCA CTCAAGCGGG
AAGAACACGC TCGACATGGT GTTGTCGGGA ATCGCGCATG AGGAAGGCAC GCTGTCGGTG
GTCATGATCG ACATCGACCA CTTCAAGCAG ATCAACGACA GCTACGGCCA TCCGACCGGC
GATCAGGTGA TCCGCAGCCT GTCGTGGCTG CTCAAGCAGC GACTGCGCAA GCACGACATC
CTCTGCCGCT ACGGCGGCGA GGAGTTCCTC GTCGGGCTGC CGCACACCGA CGCGGGCCAG
GCGCTCGCGA TCCTCGAGCG CGTGCGCCAG GATTTCGCGC AGATTCGCCA CCCCTATCGG
GACACCCATT TCAGCGCCAG CGTCAGCGCC GGCGTCGCGA GTTATCCGCA CCAGCAGAGC
GGCGACGCGC TGATCAAGGC CGCCGACGAA GCGCTCTACC AGGCCAAGCA CCGCGGCCGC
AATCGCGTCC ACATCGGCAT GCCTGCACAG GCCCTGGCCT AG
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| Protein sequence | MAARAIRWDE ALPEAAGVTP LLLLDMSGSP RPEWTARLQK LRQRFPTGQL ICLEVGSDFD
QLQQALRGGC DSCLLEGTPS HAIVEHILEL NERQEQETFR VLIVEDSKTA SHMIQRTLAE
SQIASEIVND PRQTLNALKQ FNPDLILMDM YMPDCTGVEV ARIIRQHDEF LGMPIVYLSG
ETNVALQVDA MRLGGDHFLT KPFNPVFLNT IVKSKIERYR ALRRSMYHDS LTGLLNHSSG
KNTLDMVLSG IAHEEGTLSV VMIDIDHFKQ INDSYGHPTG DQVIRSLSWL LKQRLRKHDI
LCRYGGEEFL VGLPHTDAGQ ALAILERVRQ DFAQIRHPYR DTHFSASVSA GVASYPHQQS
GDALIKAADE ALYQAKHRGR NRVHIGMPAQ ALA
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