| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1012 |
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| Symbol | |
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| ID | 3671236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1080276 |
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| End bp | 1082621 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637709694 |
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| Product | phenylalanyl-tRNA synthetase beta subunit |
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| Protein accession | YP_314770 |
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| Protein GI | 74317030 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0141167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTTT CCGAAGCCTG GCTGCGCAAG CTCGTCAATC CCGCGCTCGA TACCACCGAA
CTCGCCCACG CCCTGACGAT GGCCGGGCTC GAAGTCGAAG CGCTGACGGC GGCGGCACCG
CCTTTCAACG ATGTGGTCGT GGCGGAAATT CTCTCGGCCC AGAAGCATCC CGACGCTGAC
CGCCTGCGCG TATGCCAGGT CGACATCGGT GAGGCCGCGC CCGCGACGAT CGTCTGCGGC
GCGCCGAACG CGGCGGCGGG TCTCAAGGTT CCGTGCGCGC GCCCGGGGGC GAAACTGCCG
GGCATCGAAA TCAAGGTCGC CAAGGTGCGC GGCGTCGAGT CGTTCGGCAT GCTGTGCTCG
ACGAAGGAAC TCGGCCTCGA AGGCGCAGCC GACGGCCTCA TGGTGCTTCC CGACGATGCG
CCCGTGGGGG AGGACCTGCG TGGCTGGCTC AATCTCGACG ATACGCTCGT CACGCTGAAG
CTCACGCCGA ACCGGGCGGA CTGCCTGTCG CTCGTCGGCA TCGCGCGCGA AGTCGGCGCG
ATTACCGGTG CAGAAGTCCG CATTCCCCAG GCATCGCCGG TCGCGCCCCG CATCGCCGAT
ACCGTCGAGG TGACGGTCGC CGCGAGCGAC GCGTGTTCGC GCTACCTCGG CCGCGTCGTG
CGCGGCATCG ACGCCCAGGC GACGACGCCG CGCTGGATGG CCGAGCGCCT CGAGCGGGGC
GGCATCCGCC CGCTGCTCGC GCCGATCGAC GTCACCAATT ACGTCCTGCT CGAGCTGGGC
CAGCCGATGC ACGCCTTCGC GCTGTCGCGC CTGTCCGGCG GGATCGAGGT GCGGCTGGCG
CGCGCGGGAG AAACGCTCGC GCTGCTCAGT GGGCAGACGG TCGAACTGTC GCCCGACATG
CTGGTGATCG CCGACGCGAG CGGTCCGGTC GCGCTCGCCG GGATCATGGG CGGGCAGGCG
ACCAGCGTCG AGCGCGCCAC CGTCGACGTC TTCCTCGAAG CCGCGTTCTT CGCCCCCGCA
GCGATCGCCG GGCGTGCGCG TCGCCTGGGG CTTTCGACCG ATTCGGCGCA CCGCTTCGAG
CGCGGCGTCG ATTTCGGTGC GATCCACGCG GCGATGGAGC GCGCGACGCA ACTGCTGCTC
GACATCTGTG GCGGTCAGCC GGGGCCGATC AGCGAGGTCA CGGGTTCGCT GCCGCGGCGC
GAGCCGATCG AGCTGCGTCT TTCCCGCCTG CGCCGCGTTG CCGGCGTCGA GCTTGGCGCC
GATCAGGTCA TCCGGGATCT CGCCGCGCTC GGCTGTGTCG TCGAGCAGGC GGATGAGCGT
CTCGTCGTTA CCCCGCCGAG CTTTCGCTTC GACCTCGCGA TCGAGGAAGA CCTGATCGAG
GAGGCCGTCC GTCTGTTCGG CTACGACCGC ATTCCGGCGC GGCCGCCCGC CGCGCCCTCG
CGCATGCTTG CGCAAGACGA AACGCGGATC GCCGACGACG CGCTGCGGCA AAAGATGGTC
GACCTCGATT ATCAGGAGGT CATCACCTAC AGCTTCGTCG ATCCGGCAGG GGAGCAGGCG
CTCGACCCCG ACGTACGCCT GCTCACGCTC GCGAACCCGA TCGCGAGCCA GCTTTCGGTC
ATGCGTACGA CGCTATGGGG CGGACTGATC GAGACGCTGC GCCACAACCT GAACCGTCAG
CAGGAGCGGG TGCGGATCTT CGAACTCGGG AGGGTGTACG CCTCGCTCGC CGAGCAGCCG
CGGAAGCTCG GCGGCCTGGC CTACGGCGAA GCGCTGCCCG AGCAGTGGGG CGTGCCGGGG
CGACGCGTCG ATTTCTTCGA CGTCAAGGGC GACCTCGAGC GGCTTTTCGG GCAGCCGCTC
GACGCCGGGC GCGGCGAGCA TCCTGCGCTT CATCCCGGGC AAAGCGCCGC GCTCTGGGTG
GACGGTCACC GCGGGGGCTG GATCGGCGCC CTGCATCCGC GTCTGGTGCA GGCGTTCGAC
CTCGCCGCCG CGCCGGTATT GTTCGAGCTC GACAGCGAAA TCCTTGCCCG GCGTGCGTTG
CCGCGACACG CGGGGCTGTC GCGCTTTCCG CAGGTCCGCC GCGATCTTGC CTTCGTCCTG
GACGCCGGCC TTGCCGCGGG CGACTTGCTC GCGGCGCTAC GTGAAGCGGC GCCGGCATCG
ATACGCGCGA TCGAAGTGTT CGACGACTAC CGGGGAAAGG GTGTGGATCA GAACCAAAAA
AGCCTTGCAA TACGGGTAGT TATGCAAGAT ACTGAACGCA CATTGACGGA TCGGGATGTC
GACGAAGCGG TGCAGAAACT GGTCGACGCC GCCGCCCGTC GGTGCAGCGC CACGCTGCGC
GCATGA
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| Protein sequence | MQFSEAWLRK LVNPALDTTE LAHALTMAGL EVEALTAAAP PFNDVVVAEI LSAQKHPDAD
RLRVCQVDIG EAAPATIVCG APNAAAGLKV PCARPGAKLP GIEIKVAKVR GVESFGMLCS
TKELGLEGAA DGLMVLPDDA PVGEDLRGWL NLDDTLVTLK LTPNRADCLS LVGIAREVGA
ITGAEVRIPQ ASPVAPRIAD TVEVTVAASD ACSRYLGRVV RGIDAQATTP RWMAERLERG
GIRPLLAPID VTNYVLLELG QPMHAFALSR LSGGIEVRLA RAGETLALLS GQTVELSPDM
LVIADASGPV ALAGIMGGQA TSVERATVDV FLEAAFFAPA AIAGRARRLG LSTDSAHRFE
RGVDFGAIHA AMERATQLLL DICGGQPGPI SEVTGSLPRR EPIELRLSRL RRVAGVELGA
DQVIRDLAAL GCVVEQADER LVVTPPSFRF DLAIEEDLIE EAVRLFGYDR IPARPPAAPS
RMLAQDETRI ADDALRQKMV DLDYQEVITY SFVDPAGEQA LDPDVRLLTL ANPIASQLSV
MRTTLWGGLI ETLRHNLNRQ QERVRIFELG RVYASLAEQP RKLGGLAYGE ALPEQWGVPG
RRVDFFDVKG DLERLFGQPL DAGRGEHPAL HPGQSAALWV DGHRGGWIGA LHPRLVQAFD
LAAAPVLFEL DSEILARRAL PRHAGLSRFP QVRRDLAFVL DAGLAAGDLL AALREAAPAS
IRAIEVFDDY RGKGVDQNQK SLAIRVVMQD TERTLTDRDV DEAVQKLVDA AARRCSATLR
A
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