Gene Tbd_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1008 
Symbol 
ID3671232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1077920 
End bp1078387 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content58% 
IMG OID637709690 
Producttranslation initiation factor 3 
Protein accessionYP_314766 
Protein GI74317026 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0442083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00912814 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGTTTGG TCGGCGCGGA AGGGGAGCAG CTTGGCATCG TAAAGATCTA CGAGGCGCTG 
CGGCAGGCTG AGGAAGCTGA CCTGGACCTG GTAGAGATCG CGCCCACGGC GCAGCCGCCC
GTGGCCAAGA TCATGGACTA CGGCAAGTTC AAGTATCAGG AAAGCAAGAA GCAGCACGAA
GCCAAGCTCA AGCAGAAGCA GGTCCAGATC AAGGAAATCA AGTTCCGTCC GGGCACGGAC
GAGGGCGATT ACCAGATCAA GCTGCGGAAC CTGATCAAGT TTCTTGAAGA AGGCGATAAG
ACGAAGATTA CGCTGCGTTT CCGGGGCCGC GAAATGGCCC ACCAGGAAAT CGGCATGGCG
CAGTTGAGAC GGGTGTCGAC GGATCTGGCC GAATTGGCCG TCGTCGAGCA GTTCCCGAAG
ATGGAAGGTC GTCAGCTCGT GATGATGCTG GCGCCGAAGA AGAAATAA
 
Protein sequence
MRLVGAEGEQ LGIVKIYEAL RQAEEADLDL VEIAPTAQPP VAKIMDYGKF KYQESKKQHE 
AKLKQKQVQI KEIKFRPGTD EGDYQIKLRN LIKFLEEGDK TKITLRFRGR EMAHQEIGMA
QLRRVSTDLA ELAVVEQFPK MEGRQLVMML APKKK