| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1007 |
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| Symbol | |
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| ID | 3671231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1075850 |
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| End bp | 1077763 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637709689 |
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| Product | Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase |
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| Protein accession | YP_314765 |
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| Protein GI | 74317025 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.245371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0129716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACTG TCACGCTGCC CGACGGCTCG GTCCGCCCCT TCGAGGGTCC CGTCACGGTC
GCCGAGGTCG CGTCGAGCAT CGGCGCCGGG CTTGCCAAGG CGGCACTCGC GGGCAAGGTC
GACGGCAAAC TCGTCGATAC CAGCTACGTG ATCGACGCCG ACGCGCAGCT CGCGATCGTC
ACCGCCAAGG ACGCCGAGGC GCTCGACCTG ATCCGCCACG ACGCGGCGCA CGTGATGGCG
CAGGCCGTGC AGGAGCTCTA CCCGGGTACC CAGGTGACGA TCGGCCCGGC GATCGAGGAC
GGCTTCTACT ACGACTTCGC GCGCGAGCAG CCTTTCACGC CAGAAGACCT CGAGAAGATC
GAGAAGCGCA TGGACGAGAT CGTCAAGCGC GACCTGCCGA TCCGGCGCGA GGTGTGGAGC
CGCGACGAGG CGATGAAGGT GTTCGGCGAT CTCGGCGAGA CCTACAAGGT GCAGATCATC
GACGAGGTGA TACCCAAGGG CGAGGAGCTG TCGATCTACC GTCAGGGCGA GTGGTTCGAC
GTCTGCCGCG GCCCCCACCT GCCGTCGACC GGCAAGTTGC CGCGCGCGTT CAAGCTGATG
AAGCTCGCCG GCGCGTACTG GCGCGGCGAC TCGAAGAACG CGATGCTGCA GCGCATTTAC
GGCACGGCGT GGGCGAAGAA GGAGGACCTC GAGGCCTATC TGCACCGGCT GGAGGAGGCC
GAGAAGCGCG ACCACCGCCG GCTCGCCAAG CAGCTCGACC TCCTGCACAT GCAGGATGAA
GCGCCGGGCA TGGTGTTCTG GCACCCCAAG GGCTGGATCG TCTGGCAGCA GATCGAGCAG
TACATGCGCG AGAAATTCGT CGAATACGGC TATCAGGAAG TGCGCACGCC GGCTGTCATG
GACCGCAGCA TGTGGGAGAA ATCCGGCCAC TGGGAAAACT ACCGCGACAA CATGTTCACG
ACGGCGTCGG AAAACCGCGA CTACGCGGTC AAGCCGATGA ACTGCCCAGG TCACGTGCAG
ATCTTCAATA GCGGGCTGCA TTCCTATCGG GACCTGCCGC TCAGGCTCGC CGAGTTCGGC
TCGTGCCACC GCAACGAGCC GTCGGGCGCG CTGCACGGCA TCATGCGCGT GCGCGGCTTC
ACTCAGGACG ACGCGCACAT CTTCTGCATG GAGGAGCAGG TCGAGCAGGA GGTGGCCGAC
TTCATCGTCA TGCTGCAGAA GGTCTACGCC GACTTTGGCT TCAACGACGT ATTGGTCAAG
CTTTCGACCC GGCCCGACAA GCGCGTCGGC TCGGACGAGA GCTGGGATAA GGCCGAGTCG
GCGCTCGCAG CCGCGCTCGA GAAGAACGGT CTCTCCTTCG ACCTGCAGCC GGGTGAGGGC
GCGTTCTACG GGCCGAAGAT CGAATTCACG CTCAAGGACA CGCTCGGCCG TCTGTGGCAG
TGCGGCACGA TCCAACTCGA CTTCAACCTG CCGGTGCGGC TCGGCGCCGA ATTCGTCGCC
GAGGACAACA CGCGCAAGAT CCCGGTGATG CTCCACCGCG CGATCCTCGG CTCGATGGAG
CGCTTCATCG GCATCCTGAT CGAACACCAC GCCGGGAACT TCCCGTTGTG GCTCGCGCCG
GTCCAGGTCA TGGTGATGAA CATCAGCGAG CGCCAGGCGG CCTACGCCGA GGCGGTCGCC
GAGGCCTTGC GCCGCGCCGG AATCCGGGCC GCGCTGGACT TGAGTAATAA CAAGATTAAC
TATAAAATCC GCGAGCACAG CTTGCAGAAG CTGCCCTATC AGCTTGTCGT CGGCGACAAG
GAAATGGAGG CGCGCGTGGT CGCAGTCCGC GCCCGCGGCA ACCAGGACAT GGGGCAGTTG
GGTTTGGATG ACTTGATTGC GCGGCTCAGG GCGGAAGTCC TGGCGCGTCA GTAA
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| Protein sequence | MVTVTLPDGS VRPFEGPVTV AEVASSIGAG LAKAALAGKV DGKLVDTSYV IDADAQLAIV
TAKDAEALDL IRHDAAHVMA QAVQELYPGT QVTIGPAIED GFYYDFAREQ PFTPEDLEKI
EKRMDEIVKR DLPIRREVWS RDEAMKVFGD LGETYKVQII DEVIPKGEEL SIYRQGEWFD
VCRGPHLPST GKLPRAFKLM KLAGAYWRGD SKNAMLQRIY GTAWAKKEDL EAYLHRLEEA
EKRDHRRLAK QLDLLHMQDE APGMVFWHPK GWIVWQQIEQ YMREKFVEYG YQEVRTPAVM
DRSMWEKSGH WENYRDNMFT TASENRDYAV KPMNCPGHVQ IFNSGLHSYR DLPLRLAEFG
SCHRNEPSGA LHGIMRVRGF TQDDAHIFCM EEQVEQEVAD FIVMLQKVYA DFGFNDVLVK
LSTRPDKRVG SDESWDKAES ALAAALEKNG LSFDLQPGEG AFYGPKIEFT LKDTLGRLWQ
CGTIQLDFNL PVRLGAEFVA EDNTRKIPVM LHRAILGSME RFIGILIEHH AGNFPLWLAP
VQVMVMNISE RQAAYAEAVA EALRRAGIRA ALDLSNNKIN YKIREHSLQK LPYQLVVGDK
EMEARVVAVR ARGNQDMGQL GLDDLIARLR AEVLARQ
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