Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0997 |
Symbol | |
ID | 3671220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1064266 |
End bp | 1066197 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637709678 |
Product | helicase c2 |
Protein accession | YP_314755 |
Protein GI | 74317015 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.179863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATC TGACCCACTT TTTTTCTCCG GAAGGCGCCT GCGCGGCGGT TCTCCCGGGG TGGCGCGCGC GCCCGCAGCA GCTCGCCATG GCCGAGGCGG TCGAGCGCGC GATCGCCGGC AATCTGACCT TGCTCGCCGA GGCCGGGACC GGCACGGGAA AGACGCTCGC CTACCTCATC CCCGCCCTGC GCTCGGGCGG CAAGGTAGTG ATCTCGACCG GTACCAAGGC GCTGCAGGAT CAGCTCTTCC ATCGCGATCT GCCGGCCGCG CGCCGCGCGC TGAAGTCGCC GGTCAAGGTG GCACTGCTCA AGGGGCGTGC CAATTACGTC TGCCACCATC ATCTGCAGCG CAACCTGGCG GACGGCCGTT TTGCCCACCG CGACGACGCC GCGTGGTTGC AGAAGATCGC ACGCTTCGCC GAGGCGAGCG CCAGCGGCGA CCGGGCCGAG GCCGAGGGCA TTCCCGAGGA CGCGACGGCC TGGCAATACG CCGTGTCGAC TCGCGACACC TGCCTCGGCA GCGAGTGCGC ACACTTCAAG GACTGTTTCG TCATGGCGGC GCGCAAGGCC GCGCTCGACG CCGAGGTCGT CGTGGTCAAC CACCACTTGT TCTTTGCCGA CCTCTGGCTC AAGGACGAAG GCGTCGCCGA ACTGCTGCCG GCCTGCAACA CGGTGATTCT CGACGAGGCC CATCAGCTCG CCGAAACCGC CGCGCAGTTC TTCGGCGAAA CGCTGTCGAC GGCCCAGCTG CTCGATCTGG CCGGCGACAC CAAGCGTCTG GCGGCGGTCA AGGCCGGCGA TTTTCCGGCC CTGCGGCGTG CGGCCGAGGA TCTGGCCAAG GCCGCGCGCG ATCTGCGTCT CGCCTTGCCG CAAAACCCGC TCAAGTCGAC GCTCGCCGAA ATTGGGCGCC ACGAAAAATG GCCGGACGCG CTGGCGGGGC TATCGACCGC GCTCGGCGCT GCGCGCAAGC TGCTCGAAAC CCAGGCCGAG CGCGATGCCG ACCTCAAGAA TTGTCACGAG CGCGCAGAGG CGCTTGCCGC GACGCTCGAT CGGTGGCGGC GCGACGACGA ACCTGACGCC CCCCGGGTGC GCTGGCTCGA GACCACGATG AGTTCGCTGC TGCTGCATGC CACGCCGCTT TCGGTCGGCA GCCTGTTCGG CGCCAAGCTC ACCGAACGTG CGCAGGCGTG GATCCTGACC TCGGCGACAC TGTCGGTCGG CGGCGACTTC AGCCACCTGA AAACCCGGCT CGGCATCGAG GAGGCGGAAA CCCTCTGCGT CGACAGCCCC TTCGACTACC CGCGGCAGGG CGTGCTCTAC GTGCCGCCGA ACCTGCCCGC GCCGAATACG CCGAGCTTCA CCGAGGCGGT CGTCGACGCC GCGTTGCCGG TGCTCGAAAT CAGCCAGGGG CGCGCCTTCA TTCTGTTCAC GAGCTTGCGC GCACTGGAAA AGGCGCGCGA ATTGCTCGCT GCCGCGTTCA CGTTCCGCGG CTGGGCGTTT CCCTTGCTGG TGCAGGGAGA GGCGCCGAAA AACGAACTGC TCGCACGTTT CCAGCAATCC GGCAACGCCG TCCTGCTCGG CAGCCAGAGC TTCTGGGAGG GCGTCGACAT GCCGGGCGAC GTGCTCTCTG TCGTCATCAT CGACAAGCTG CCCTTCCAGC CGCCCGACGA TCCCGTCGTC GCAGCCCGCA TCGCGCATCT CGAGAAAAGC GGCGGCAAGC CCTTCATGGA CTACCAGCTG CCGCACGCGG CGATCAGCCT CAAGCAGGGG GCGGGGCGGC TGATTCGCAC CGAGACCGAT CGGGGGGTGC TGATGATTTG TGATACGCGG CTGGCGGAGA AGCCGTACGG GCGCTTGCTG CTCAATGCGC TGCCGGCGAT GACGCGGACG CGGAAGCTGG AGGTGGTGGA GCGGTTTTTT TGCGGCGCAT GA
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Protein sequence | MSDLTHFFSP EGACAAVLPG WRARPQQLAM AEAVERAIAG NLTLLAEAGT GTGKTLAYLI PALRSGGKVV ISTGTKALQD QLFHRDLPAA RRALKSPVKV ALLKGRANYV CHHHLQRNLA DGRFAHRDDA AWLQKIARFA EASASGDRAE AEGIPEDATA WQYAVSTRDT CLGSECAHFK DCFVMAARKA ALDAEVVVVN HHLFFADLWL KDEGVAELLP ACNTVILDEA HQLAETAAQF FGETLSTAQL LDLAGDTKRL AAVKAGDFPA LRRAAEDLAK AARDLRLALP QNPLKSTLAE IGRHEKWPDA LAGLSTALGA ARKLLETQAE RDADLKNCHE RAEALAATLD RWRRDDEPDA PRVRWLETTM SSLLLHATPL SVGSLFGAKL TERAQAWILT SATLSVGGDF SHLKTRLGIE EAETLCVDSP FDYPRQGVLY VPPNLPAPNT PSFTEAVVDA ALPVLEISQG RAFILFTSLR ALEKARELLA AAFTFRGWAF PLLVQGEAPK NELLARFQQS GNAVLLGSQS FWEGVDMPGD VLSVVIIDKL PFQPPDDPVV AARIAHLEKS GGKPFMDYQL PHAAISLKQG AGRLIRTETD RGVLMICDTR LAEKPYGRLL LNALPAMTRT RKLEVVERFF CGA
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