Gene Tbd_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0975 
Symbol 
ID3671198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1040336 
End bp1040821 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID637709656 
ProductFKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) protein 
Protein accessionYP_314733 
Protein GI74316993 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00636749 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACCG TGACACGGAA CAAACTCGTA TACATCACCT ATTCCATCCT CGACGCGCGC 
GGAATGGTCG TCGAGCAGCA CGATCTGCCG GTCGGCTACG TCCAGGGCGC GCACAGCGGC
ATCCTTCCCG CAATCGAGAC GGCCGTGGCG GGGCGCAAGA TCGGCGACCG CGTCGAGATC
CAGTTGTCGC CCGAGGAGGG GTACGGACTG CGTGACGAGA GCCTGGTCTT CGTCGACGAG
ATCGAGAACG TTCCGCCCGA GTTCCGGCGC ACCGGCGCCG AAGTCATGTT CGAAAACGAG
TCGGGTGAGA CGAAGGTTTT TTACGTCACC TCGGTCGAAA ACGGCAAGGT CACGCTCGAT
GGCAACCCGT CTCTGGCCGG ACAAAGCGTG ACCTGCCTCA TCAACGTCGT CGACGTTCGC
GACGCGACGC CCGAGGAAAT CCGCAACGGC CGCCCGCTCG ACGCCGCGGG CGGAACCGTC
CATTAG
 
Protein sequence
MVTVTRNKLV YITYSILDAR GMVVEQHDLP VGYVQGAHSG ILPAIETAVA GRKIGDRVEI 
QLSPEEGYGL RDESLVFVDE IENVPPEFRR TGAEVMFENE SGETKVFYVT SVENGKVTLD
GNPSLAGQSV TCLINVVDVR DATPEEIRNG RPLDAAGGTV H