Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0954 |
Symbol | |
ID | 3672746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1016479 |
End bp | 1017765 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637709633 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_314712 |
Protein GI | 74316972 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00202583 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTC TCGATTTGCC CGGACGCAGC CGGGCCAGCG GCACCGTGCG CTTGCCGGGT TCGAAAAGCA TTTCCAACCG CGTACTGCTG CTCGCCGCGC TGGCCGAGGG CGTGACCGAC GTTTACGACG TGCTCGATTC GGACGACACG CGCTACATGC TGGCGGCGCT GCAGGCGCTC GGTGTCGGCG TCGAGGATCG CGGCGACAAC CACTGGCGGG TCACCGGCGT CGCCGGGGCG TTTCCGGCGC GCCAGGCCGA GCTCTTCCTC GGTAACGCCG GCACCGCGTT CCGGCCGCTG ACGGCCGTGC TCGCGCTGTC GGGCGGCGAC TACGTCCTCG ACGGCGTCGC ACGCATGCAC GAGCGCCCGA TCGGTGACCT CGTCGACGCG TTGCGCCAGT TGGGTGGGCG GATCGATTAT CGCGGCACGC TCGGCTTCCC ACCGCTGCAT GTCCATCCCC CGCAGGCCGG GGCGGACGTG GCCCACATCC GCGGAAACGT CTCGAGCCAG TTTCTGACCG GCCTTCTCAT GGCCTTGCCG CTCAGGCGGC TTCGCACACG CGTCGAGGTC GTCGGCGAGC TGATCTCCAA GCCCTACATC GAAATCACGC TCGCGATGCT GCGCCGCTTC GGCGTCGAGG TGGCGCGCGA CGGCTGGCAG GCCTTTTCGG TCGCCGCGGA CGCCTGCTAT CGCAGTCCGC GCGAAATCTA CGTCGAGGGC GACGCCTCGT CGGCATCGTA CTTTTTGGCC GCTGGCGCGA TCGGCGGCGG TCCGGTCCGC GTCGAGGGCG TGGGGCGCGA CAGCGTCCAG GGTGACGTCG GTTTCGCCGA CGCACTGGCT GCGATGGGCG CGCGGATCGC GATGGGACCG AACTGGATCG AAGCCTGCGC GCCAGCGCAG GGGCGTCTCA AGGCGATCGA CCTCGATTGC AACGCGATCC CAGACGCCGC GATGACGCTC GCCGTCGCGG CCTTGTTCGC CGACGGCACG ACGACGCTGC GAAACATCGC AAGCTGGCGC GTCAAGGAGA CCGACCGCAT CGCGGCGATG GCGACCGAAC TGCGCAAGGT CGGCGCGACG GTCGAGGAGG GTGACGACTT CCTGCGCGTC ACGCCGCCGG AAACCCTGCG CGCGGGCGCC GTTATCGACA CCTACGACGA CCATCGCATG GCGATGTGCC TGTCGCTCGT GTCGCTCGGC GGTGTCGCCG TCCGCATCAA CGACCCGGGC TGCGTCGCCA AGACCTTCCC CGGTTACTTC AACGCCTTTG CGGAGATCGC GCGATGA
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Protein sequence | MEFLDLPGRS RASGTVRLPG SKSISNRVLL LAALAEGVTD VYDVLDSDDT RYMLAALQAL GVGVEDRGDN HWRVTGVAGA FPARQAELFL GNAGTAFRPL TAVLALSGGD YVLDGVARMH ERPIGDLVDA LRQLGGRIDY RGTLGFPPLH VHPPQAGADV AHIRGNVSSQ FLTGLLMALP LRRLRTRVEV VGELISKPYI EITLAMLRRF GVEVARDGWQ AFSVAADACY RSPREIYVEG DASSASYFLA AGAIGGGPVR VEGVGRDSVQ GDVGFADALA AMGARIAMGP NWIEACAPAQ GRLKAIDLDC NAIPDAAMTL AVAALFADGT TTLRNIASWR VKETDRIAAM ATELRKVGAT VEEGDDFLRV TPPETLRAGA VIDTYDDHRM AMCLSLVSLG GVAVRINDPG CVAKTFPGYF NAFAEIAR
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