Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0953 |
Symbol | |
ID | 3672745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1015613 |
End bp | 1016479 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637709632 |
Product | prephenate dehydrogenase |
Protein accession | YP_314711 |
Protein GI | 74316971 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.02487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGTCG AGCGCCTCGC AGTCATTGGC GTCGGCCTGA TCGGTGGATC GTTTGCGCTC GCCCTGAAGC AGGCCGGCGC GGTTGGCGAG GTGGTCGGTG TCGGCAGGAA GCCGGCCAGC GTCGAACAGG CGCGCGCGCG CGGCCTGATC GACCGGGCCG GCGACTGGAG CGAGGCGGGA CAGGCGGACT GCGTTCTTCT GGCGATGCCG GTCGGCGAGA CCGAAACGGT GCTGCGCGCG CTCGAGCCGC ACCTGACGGC GCGCACGATC GTCACCGACG CGGGCAGCAC CAAATCCGGG GTCGTCGCGA CGGCGCGCGC GGCGCTGGGG GCGAAATGGC GCAACTTCGT GCCCGGGCAT CCGATCGCCG GCTCCGAGCA GAGCGGGCCC GATGCGGCGC GCGCCGACCT CTACCGCGGC AGGAAGGTCG TCCTGACCCC CGACGCGGAT ACCGATCCGC ACGCGCTGGC GATCGTCAAG GCGCTGTGGC AGGCCGTCGG CGCCGAGCCC GAGCTGCTCG ACGCGGCGAC GCACGACCGC GTTTTCGCCG CGGTCAGCCA CCTGCCGCAC CTCGCCGCCT ATGCCTTGGT CGACGAATTG GCGCAGCGTG CCGATCGCGA CACCTTTTTC CGCTTCGCCG CGAGCGGCTT TCGCGACTTC ACGCGTATCG CCGGCAGCAG CCCCGAGATG TGGCGCGACA TCGCGCTCGC GAACCGCGAC GCGCTACTCG GCGAACTGAA CGCCTACGTC GCGGCCCTGC AAACGCTGAG CACCGCCGTC GCGGCCGCAG ACGGCACCGC GCTGCTCGAG ATTTTTTCGC GTGCGCGGGA TGCCCGCGCG GGCTGGATCG ACACTCAGGA CCTGTAA
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Protein sequence | MIVERLAVIG VGLIGGSFAL ALKQAGAVGE VVGVGRKPAS VEQARARGLI DRAGDWSEAG QADCVLLAMP VGETETVLRA LEPHLTARTI VTDAGSTKSG VVATARAALG AKWRNFVPGH PIAGSEQSGP DAARADLYRG RKVVLTPDAD TDPHALAIVK ALWQAVGAEP ELLDAATHDR VFAAVSHLPH LAAYALVDEL AQRADRDTFF RFAASGFRDF TRIAGSSPEM WRDIALANRD ALLGELNAYV AALQTLSTAV AAADGTALLE IFSRARDARA GWIDTQDL
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