Gene Tbd_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0928 
Symbol 
ID3672719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp984317 
End bp985036 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content57% 
IMG OID637709607 
Producttransposase InsF for insertion sequence IS3A/B/C/D/E/fA 
Protein accessionYP_314686 
Protein GI74316946 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.394905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCGGCC TGATCCGAGC GTCGTTCGAA GAGAGCCAAG GTATATACGG CGCGCCACGC 
GTCTTTCTCG ATCTTCGAGA GGCCGGTGAA ACGTGTAGCA AACATCGTGT TGCACGGCTG
ATGAAAGAGA ACGGTATACG AGCGAAAGGC GGTTACCGGA CCCGACGTTA CGTCGCAGGT
GGCAAGACAG CGGAGCTGAT CCCGAACCTC GTCAAGCGCA ATTTTGACGT TTCGCAGCCC
AACCGCGTCT GGGTCACTGA CATCACGTAT GTCCGGACCT GGCAGGGCTG GCTCTACTTG
GCCGTCGTAT TGGACTTGTT CTCCCGCAAA GTGATCGGCT GGGCCACACG CCAATCCATC
CATCGAGCTC TCGTCTTAGA TGCCCTCTTG ATCGCCGTGC GTCAGCGCGC TCCAGACGGC
ACGATCGTGC ACTCCGATCA GGGCTCGCAA TACGGCAGCG ACGACTGGCG CCGCTTCTGC
CGGTCGAACG GTCTATGGCC CAGCATGAGT CGACGAGGTA ACTGCTGGGA CAACGCGGTA
GCCGAGTCCT TCTTCTCGAG CCTGAAGAAA GAGCGCATCA AGAAACGCAT CTACAACACG
CGCCAGCAAG CGACGGAAGA TATCGCGGAT TACATCGATG ACTTCTACAA TCGAACGCGA
AGACACAAAC ATTTATCGGG CGTGAGCCCC GAACAATTTG AAGCCGCAGC AACCCGTTAA
 
Protein sequence
MLGLIRASFE ESQGIYGAPR VFLDLREAGE TCSKHRVARL MKENGIRAKG GYRTRRYVAG 
GKTAELIPNL VKRNFDVSQP NRVWVTDITY VRTWQGWLYL AVVLDLFSRK VIGWATRQSI
HRALVLDALL IAVRQRAPDG TIVHSDQGSQ YGSDDWRRFC RSNGLWPSMS RRGNCWDNAV
AESFFSSLKK ERIKKRIYNT RQQATEDIAD YIDDFYNRTR RHKHLSGVSP EQFEAAATR