Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0860 |
Symbol | metG |
ID | 3671624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 910688 |
End bp | 912760 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637709538 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_314618 |
Protein GI | 74316878 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only |
COG ID | [COG0073] EMAP domain [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00024146 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTC AAATCCTCGT CACCTCTGCG CTGCCCTACG CCAACGGCAG CATTCATCTG GGTCATCTGG TCGAGTACAT CCAGACCGAC ATTTGGGTGC GTTTCCAGAA AATGCGGGGC ACCAACTGCC GCTACATGTG CGCCGACGAC ACGCACGGCA CCGCGATCAT GCTGCGCGCC GAGAAGGAAG CCATCACACC CGAGGCGCTG ATCCAGCGCG TGTGGGCCGA ACACACGCGC GATTTCGCGG GCTTCCACAT CGGCTTCGAT CACTATTACT CGACGCACTC GGACGAGAAC CGCGAACACG CATCGAAGAT CTACCTGGCC TTGAAGGACG CCGGGCTGAT CGAGGTGAAG ACGATCGCGC AGCTGTACGA CCCGGTGAAG AACCTCTTCC TGCCCGACCG CTTCATCAAG GGCGAATGCC CGAAGTGCGG CGCGGCGGAC CAGTACGGCG ACAACTGCGA GGTCTGCGGC GCGACCTACA GCCCGACCGA GCTCAAGAAC CCCGTCTCGG CGGTGTCGGG CGCGACGCCG GTGCACAAGG ATTCCGAGCA CTACTTCTTC AAGCTCGGCG ACTGCGAGGC CTTTCTGCGC GAGTGGACCA CCTCAGGGAC GCTGCAGGCC GAGGCCGCTA ACAAGATGCA GGAGTGGTTC GCGGCGGGAC TCAACAACTG GGACATCAGC CGCGACGCGC CCTACTTCGG CTTCGAGATC CCCGACGCGC CGGGCAAGTA TTTCTACGTC TGGCTCGACG CGCCGGTCGG CTACATGGCG AGCTTCGCCA GATATGCGAA GGACCACGGC CTCGACTTCG ACGCCTGGTG GGGCAAGGAT TCGAAGACCG AACTCGTGCA CTTCATCGGC AAAGACATCC TGTATTTCCA CGCCTTGTTC TGGCCGGCGA TGCTCAAGTT CTCCGGCCAC CGCCTGCCGA CCGCCGTCTA CGCGCACGGC TTCCTGACCG TCAACGGCCA GAAGATGTCG AAGTCGCGCG GCACCTTCAT CACCGCGTCG AGCTATCTCG ACCAAGGCCT CAACCCCGAG TGGCTGCGCT ACTACTACGC TGCGAAGCTC AACGGCACGA TGGAGGACAT CGATCTCAAC CTCGACGACT TCGTCGCGCG CGTGAACTCG GACCTCGTCG GCAAGTTCAT CAATATCGCG AGCCGCACGG CCGGCTTCAT CCACAAGAAG TTCGACGGCA AGCTCGCCGA CGGCGTCGGC AACATTGAAC TAATCGGCGA ATTCCAGGCC GCGGCCGACA CGATCGCCGC GCACTACGAG GCGCGCGACT ACGCCAAGGC GCTCAGGGAG ATCATGGCGC TCGCCGACCG CGCGAACCAG TATGTTGCCG ACGAAAAGCC GTGGGAACTG GCCAAGGACG ACGCAGCGGT CTACCGCCTG CACGAGGTCT GCACGGTCGC GCTCAACCTG TTCCGCCTGC TCACGCTTTA CCTCAAGCCC GTGTTGCCCA AGCTCGCCGG CGAAGTCGAG CGCTTCCTCG ACATCCCCGC CCTCACGTGG AAAGACGCGC GAAGTCTTTT CATCCGCCAG GCCATCAACG CATACAGCCA TCTCATGACC CGCATCGATC CCAAATCCAT CGAAGCCATG GTAGACGCCA ACAAGCAGAA CCTCGAACCC ACTCCCGCCC CGGCCCCCGC CCGCCACGCC GAGGCGCAGG CGCATGCCGC GCAGGCCGTC GAAGCACCGA AGACCGAGAC GATCTCGATC GACGACTTCG CGAAGGTCGA CCTGCGCATC GCGCGCATCG CCAACGCGGA GCACGTCGAA GGCGCCGACA AGCTGCTGCG CTTGACGCTC GACGTCGGTG AACTCGGCCC CCGCCAGGTA TTCGCCGGCA TCAAGTCGGC CTACGCGCCC GAAGCGCTGG TCGGCCGGCT GACCGTCATG GTCGCCAACC TCGCGCCGCG CAAGATGAAG TTCGGCATGA GCGAGGGCAT GGTGCTCGCC GCCTCCAACC CCGACGGGCA TAAAGACGAC GTGCCCGGCC TCTTCATCCT CTCGCCCGAC AGCGGCGCCG AGCCGGGCAT GAAGGTCAAG TAA
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Protein sequence | MSRQILVTSA LPYANGSIHL GHLVEYIQTD IWVRFQKMRG TNCRYMCADD THGTAIMLRA EKEAITPEAL IQRVWAEHTR DFAGFHIGFD HYYSTHSDEN REHASKIYLA LKDAGLIEVK TIAQLYDPVK NLFLPDRFIK GECPKCGAAD QYGDNCEVCG ATYSPTELKN PVSAVSGATP VHKDSEHYFF KLGDCEAFLR EWTTSGTLQA EAANKMQEWF AAGLNNWDIS RDAPYFGFEI PDAPGKYFYV WLDAPVGYMA SFARYAKDHG LDFDAWWGKD SKTELVHFIG KDILYFHALF WPAMLKFSGH RLPTAVYAHG FLTVNGQKMS KSRGTFITAS SYLDQGLNPE WLRYYYAAKL NGTMEDIDLN LDDFVARVNS DLVGKFINIA SRTAGFIHKK FDGKLADGVG NIELIGEFQA AADTIAAHYE ARDYAKALRE IMALADRANQ YVADEKPWEL AKDDAAVYRL HEVCTVALNL FRLLTLYLKP VLPKLAGEVE RFLDIPALTW KDARSLFIRQ AINAYSHLMT RIDPKSIEAM VDANKQNLEP TPAPAPARHA EAQAHAAQAV EAPKTETISI DDFAKVDLRI ARIANAEHVE GADKLLRLTL DVGELGPRQV FAGIKSAYAP EALVGRLTVM VANLAPRKMK FGMSEGMVLA ASNPDGHKDD VPGLFILSPD SGAEPGMKVK
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