| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0858 |
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| Symbol | |
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| ID | 3671622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 906765 |
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| End bp | 910190 |
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| Gene Length | 3426 bp |
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| Protein Length | 1141 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637709536 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_314616 |
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| Protein GI | 74316876 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000342881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.701952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC CCCGCTTCAT CCATCTTCGT CTGCACACCG AGTATTCGAT CGTCGACGGC
CTGGTGCGGG TCGACGAGGC GGTCAAACGG GCCCGCGAGA TCGCGATGCC GGCGCTCGGC
GTCTCCGACC TGTCCAACAC CTTCGGCTGG GTCAAGTTCT ACCGCGCGGC GCGCGGCGCG
GGCGTCAAGC CGATCTTCGG CTGCGACGTC TGGGTGAGCA ATGCGACCGA CCGCAACCGG
CCCTCGCGCC TGCTGCTCCT GGTGCAGCAC CGCGAAGGCT ACCGCCGACT GTGCGAGCTG
CTGACGCGCG CCTACCAGGA GAATCTCCAC CGCGGTCGCG CCGAGATCGA CCCGTCCTGG
CTCGCCGAGA ACAACGGAGG ACTTCTGGCG CTGTCGGGCG GCGACGGCGG CAACGTCGCG
CAGGCGATCA TCGACGACAA GCCCGCTGTG GCACGCGCGG CGGCCGAGGC CTGGGCCGCG
CTCTTCCCGG GCCGTTACTA CCTCGAACTG CAGCGCTTCG GCCAGGCGCA CACCGAACGG
CTGATCGACG GGCTGCTCGA CATCGGCGCC GAGCTCGGCC TGCCGGCGGT CGCGACGCAT
CCGATCCAGT TCCTCGCGGC CGACGATTTC AAGGCGCACG AGGCGCGCGT GTGCATTGCC
GAAGGCATGA TGCTCGGCGA TCCGCGCCGG CCGCGGCCCT TCACGGCGGA ACAGTACTTC
AAGACCCCCG ACGAGATGGC GGCGCTTTTC GCCGACCTGC CCGAGGCGCT CGCCAACAGC
GTCGAAATCG CCAAGCGCTG CAATCTCACG CTCGAACTCG GCAAGAGCAA GTTGCCCGAC
TTCCCGACGC CGGATGGCAT GGGCCTCGAC GACTACATGC GGCAGCGCGC GTACGAAGGG
CTCGCCGAGC GCATGGCCCA CCTCTATCCG GACGAAGCCG AGCGCGCGGC GAAGCGGCCC
GAATATACCG AGCGGCTCGA ATTCGAGCTC GGGACGATCA TCCAGATGGG GTTTCCAGGC
TATTTCCTGA TCGTCGCCGA CTTCATCAAC TGGGCCAAGA ACAATGGCGT GCCGGTCGGG
CCGGGGCGCG GCTCGGGCGC GGGTTCGCTG GTCGCCTACT GTCTGCGCAT CACCGACCTC
GATCCGCTCG CCTACGACCT GCTGTTCGAG CGCTTTCTCA ACCCCGAGCG GGTGTCGATG
CCCGACTTCG ATATCGACTT CTGCCAGGAC GGCCGCGACC GCGTCATCCA GTACGTCAAG
GACAAATACG GCCATGCGGC AGTGTCGCAG ATCGCGACCT TCGGCACGAT GGCGGCCAAG
GCCGTATTGC GCGACGTCGG CCGCGTGCTC GACCTGCCTT ATCTTTTCGT CGACAAGTTC
GTCAAGCTCG TGCCGAACGA ACTCGGCATC TCGCTCGCCG AGGCGCGCGA AAAGGAACCG
CAGATCGACG AGCGGGCGAG GAACGAGGAA GAACTCGCGG AATTGCTGCC GCTCGCGGAA
AAGCTCGAGG GCATCACGCG CAACGTCGGC ATGCACGCGG GCGGCGTGCT GATCGCGCCG
GGCAAGCTCA CCGATTTCTG TCCGCTCTAC CAGGCCGAAG GCTCGGACGC CGCGGTGTCG
CAGTTCGACA AGGACGACGT CGAGGCGATC GGTCTCGTCA AGTTCGACTT CCTCGGCTTG
CGCACGCTGA CGATCCTGGC CGAGGCGGTC CGCTTCGTGC AGCGCCACGA AGACCGCAAG
GACTTCAGGC TGGAGGATCT GCCGCTCGAC GACCCGGCGG TGTACCGCCT GTTTGCCGAC
GGCAACACGA CCGCGGTCTT CCAGTCCGAA TCGCGCTCGG CGAAGGACCT CGAAAAGCGA
CTCAAGGGCG ACTGCTTCGA GGACATCATC GCGCTGATGG CGTTGAACCG GCCGGGGCCG
CTCGGTTCGG GCATGGTCGA CGACTTCATC GCGCGCAAGC AGGGCAAGCA GAAACCCGAG
TATTTCCATC CCGATCTCGA GCCGGTGCTG AAGTCGACCT ACGGCATCAT CGTCTACCAG
GAGCAGGTCA TGCTCGTGGC GCAGATCCTC GCCGGCTACA GCCTGGGTGG CGCCGACATG
CTGCGGCGCG CGATGGGCAA GAAGAAGCCC GAGGAGATGG CCAAGCAGCG GGCGATCTTT
CTCGAAGGGG CCGACAAGCG CGGGGTCGAC GTCAAGATCG CCGAGCGCCT GTTCGACCTG
ATGGAGAAGT TCGCGGAATA TGGCTTCAAC AAGTCGCACT CCGCGGCCTA CGCGCTGGTC
GCCTATCACA CGGCCTGGCT CAAGGCCTAT TACCCGGCCG AGTTCATGGC GGCGACGATG
TCGTCGGAAA TGTCGGACAC CGACAAGGTG CGGATCTTCT ACGAAGACTG CCGGGCCAAC
GGGCTGACGA TGTTGCCGCC CGACATCAAC CTCTCCGGCT ATCGCTTCGA TCCGGTCAGC
CGAACCGAGA TCCGCTACGG CCTCGGCGCG ATCAAGGGCA GCGGCGAAGC CGCGATCGGC
GCGATCGTCG CCGAGCGTGG GGCGAACGGC CCGTACAAGG GTCTTTTCGA CCTTGCGCGG
CGGGTCGACA AGCGCTATCT GAACCGCCGC GTGCTCGAGG CGCTGGTCAA GGCGGGCGCG
TTCGACAGCC TCAGCGACCA CCGCGCGAGC CTCATGGCGT CGATCGGCGT CGCCCTCGAG
ACCGCTGACC GCGCGGCCCG CAGCGGCGGG CAAGTCGGGC TGTTCGGCGA AGTGCTCGAA
GGCGGCGGTG AGGATCTGGT CGACGTGCCG TACTGGCCCG AGCAGGAAAA GCTGCTGCAG
GAAAAGTCCG CGCTCGGCTA TTTTTTCAGC GGGCACCCGT TCACCGCCTA CCTTGCCGAA
GTGTCCGGTT TCGCCAAGCG GCGGCTCGAC AGCCTCGAAC CCGCGCGCGA ACCCGTGATG
CTCGCCGGCG TCGCGGTGTC TTTGCGCACG CAGATGACGC GGCGCGGCAA GATGCTGATC
CTGCTGCTCG ACGACGCGAC AGCCCAGGTC GAAGTCGTGA TCTTCAATGA GCTCTACGAG
CAGAGCCGCC ATCTCCTCAA GGACGACGCG CTGCTCGTCA TCGAAGGCAA GGTCAGCCGC
GACGACTATT CAGGCGGCGT GCGGGTGACG GCCGAGCGCA TCTACGATCT CGCCGGCGCG
CGCACGCGCT TCGCCCAGGG GCTCCGGCTG GTCTGCAACG GCCAGTCCAG CGGGAGAGCA
CTGAGCGAGC TGCTCGCGCC CTATGCGATG GAGGAGGGCG GCTGCCCCGT CTGGATCGAA
TACCACAACC ACAACGCGCG TTGCCGCGTG CGCCTGGGCG AGCGCTGGCG CGTCCGTCTC
GACGACCGCC TGATCGAGTC GCTCGGCGGC TGGCTCAAGC CCGAGGCCGT CAGCGTCATC
TACTGA
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| Protein sequence | MTDPRFIHLR LHTEYSIVDG LVRVDEAVKR AREIAMPALG VSDLSNTFGW VKFYRAARGA
GVKPIFGCDV WVSNATDRNR PSRLLLLVQH REGYRRLCEL LTRAYQENLH RGRAEIDPSW
LAENNGGLLA LSGGDGGNVA QAIIDDKPAV ARAAAEAWAA LFPGRYYLEL QRFGQAHTER
LIDGLLDIGA ELGLPAVATH PIQFLAADDF KAHEARVCIA EGMMLGDPRR PRPFTAEQYF
KTPDEMAALF ADLPEALANS VEIAKRCNLT LELGKSKLPD FPTPDGMGLD DYMRQRAYEG
LAERMAHLYP DEAERAAKRP EYTERLEFEL GTIIQMGFPG YFLIVADFIN WAKNNGVPVG
PGRGSGAGSL VAYCLRITDL DPLAYDLLFE RFLNPERVSM PDFDIDFCQD GRDRVIQYVK
DKYGHAAVSQ IATFGTMAAK AVLRDVGRVL DLPYLFVDKF VKLVPNELGI SLAEAREKEP
QIDERARNEE ELAELLPLAE KLEGITRNVG MHAGGVLIAP GKLTDFCPLY QAEGSDAAVS
QFDKDDVEAI GLVKFDFLGL RTLTILAEAV RFVQRHEDRK DFRLEDLPLD DPAVYRLFAD
GNTTAVFQSE SRSAKDLEKR LKGDCFEDII ALMALNRPGP LGSGMVDDFI ARKQGKQKPE
YFHPDLEPVL KSTYGIIVYQ EQVMLVAQIL AGYSLGGADM LRRAMGKKKP EEMAKQRAIF
LEGADKRGVD VKIAERLFDL MEKFAEYGFN KSHSAAYALV AYHTAWLKAY YPAEFMAATM
SSEMSDTDKV RIFYEDCRAN GLTMLPPDIN LSGYRFDPVS RTEIRYGLGA IKGSGEAAIG
AIVAERGANG PYKGLFDLAR RVDKRYLNRR VLEALVKAGA FDSLSDHRAS LMASIGVALE
TADRAARSGG QVGLFGEVLE GGGEDLVDVP YWPEQEKLLQ EKSALGYFFS GHPFTAYLAE
VSGFAKRRLD SLEPAREPVM LAGVAVSLRT QMTRRGKMLI LLLDDATAQV EVVIFNELYE
QSRHLLKDDA LLVIEGKVSR DDYSGGVRVT AERIYDLAGA RTRFAQGLRL VCNGQSSGRA
LSELLAPYAM EEGGCPVWIE YHNHNARCRV RLGERWRVRL DDRLIESLGG WLKPEAVSVI
Y
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