| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0834 |
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| Symbol | |
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| ID | 3673531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 881891 |
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| End bp | 885622 |
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| Gene Length | 3732 bp |
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| Protein Length | 1243 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637709512 |
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| Product | putative signal peptide protein |
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| Protein accession | YP_314592 |
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| Protein GI | 74316852 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0654835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.24318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCGCG CTGGCTGGGT GCTCGCGGGT TTGCTCGGAC TCCTGGCGCT GCTGCTTGGG
GCTGCCGCCA CGCTGGCGAC GACGGCAACG GGTTTTCGCT GGCTCGCCGA CGCGGCGAGC
GCGCTCTCCG GCGAGCGGCT GAAATTGGAA GGCGTCAGCG GCCATCTCGG CGCACCGATC
GCGGTCAAGC GTCTCACACT GGTCACGCAG TTGAGGCGTA TCGAAGCCGA AGACCTTCGC
CTGCGCTGGC AGCCGCGTGC CCTATGGGAG CGCCGTCTCG AAGTCGAGCT GCTCGCCGCG
CGGGTCGTGC GCGTCGACGT CCTGCGCGAG GACCCGAGGC CGCCCCAGCT TCCGGCAAGC
CTGCGCCTGC CGCTCGACGT GCGCGTGCAC GCCTTCGATC TCGGCCGGCT CGAGATGACG
AACGCGGCGT CGATGCAGAT CTTCCGTCGC CTCCACGCGC GCCTCGACGG TCGCGGCGAC
CGCTATCGCG TGTCCGGCGC GCGCGTGCTC ACGCCCTGGG CCGACGTAAC GGGGCGTTTT
GAGCTCGGCA AGGACGCGCC ATTCGCCCTG CAGGGCAGCT TCGACGCGAC CCGCCGCGAG
CCGCTGCCGC TGCATGCGCG GCTGCGCCTG GCCGGCTCGC TCGCTGCGCT GCGCTTCGAG
GGCGACGCGA CGGCCGAAGG CATGAGCGTG GTCGCCAGCG GCGAGGCGGC GCCGTTCGCC
GAGGTGCGGC TGCGGCGGGT GCTGCTCGCC GGGCAGGGCA TCGACCCGCG CCGCCTTGCC
CCCGGCGCGC CGACGGCCGA CCTTGCCTTT TCCGGCGTGT TCGAGGGCCG CGCGGGCGAA
CGGCTGATCG GAACGTTCAG CCTCAGCAAC GCGCTCGCCG GGCGCCTCGA TCAGGAGCGG
CTGCCCTTGG CCAATCTCAG CGGTGCCGTC TTCGGCGACG TCGCGGCGGC CGACTTCAGG
GCGCTGACTG TCGATCTCGG CGCCGCCGGA CGGTTCAGCG GCGCGGGGCA GTGGCGCAAC
GGCCGCGCCG TGCTCGACCT CGTCAGTCCG CGCGTCGATC TCGCCGCGCT GCACGGCAAG
CTCTATCCGA CGCGCATGGC GACACGCTTG CAGTTCGCCG GCGACCTGGC CCGGCAGACG
CTCGACGGGA CATTCTCCGA GCGCTGGGGC GAAGGCCGCT TCGCGCTCAG CCGCGACGCG
GCGCGCCTGC GTCTCGAGAC CCTGCAGTTT CGCGGGCGGG CCGGACAGCT GACCGCGTCG
GGCGAAATGC AGTCCGACGC CACGCGCGCG TTCGCCGCCC GCTTCGACGC CACGCGGATC
GACCCCGCGC AATTCGGCAA GCTGCCGCGC GCGCGGCTGA ATCTGCGCGG CGCGCTCAGC
GGTGCGCTGG CCCCGCAGCC GCGGCTTCTC GCCGAGTTCA CCCTGCCCAC GGGGGAGCTC
GAAGGCAGCC CGATACGCGG CCATGGGCGC CTGCGTTACG CCGAGGGGCA TCTCGCGGAC
GCCGACATCG ATCTCGATCT CGCCGGTAAC CGCGCAACGT TTACCGGCGC TTATGGCCGC
GCCGGGGACC GGCTCGACTG GAACGTCGAT GCACCCGACC TCGGGCGGCT CAAGTTCGGC
CTGGACGGGC AGCTGACGAG CCGCGGCAGC GTCGCCGGCG ATCCGGCCGC GCCGCAGGTC
GAGATGCAAC TCGCCGCCCG CGCCTTGCGG CTGCCCGGCG GCGTCGCGGT CGAGCACGCC
GATCTCGCAC TCACATTGCA GGCGACCGCG CGCGGCGCCT TCGAGGGCCG GGTCGACGCG
CGCGGCGTGC GCGTCGCCGG GCAGCGCATC GCCACGCTCA GCGCCACGCT CGACGGGCAG
CGCGCGGCGC ATACGCTGGC GCTCGACGCG TCCTTGCCGC AGGGGCGGCT CAACGCGACG
CTCGCCGGCG GCCTCGGCGC CGACTCGGTC TGGCGCGGTC AGTTGCAGAA GGCCGCGCTG
CAGGGCGAAT GGCCGATCGT GCTCACGGCG CCGGCGACGC TCGTGCTCGG CCGCGCGCAG
CAACAGGTCG ACGGGCTCGT GCTGTCGGTG GCAGGGGGCC GGGTGGCCAT CGAGCACTTC
AGCCGCCGCG GCACGCAGCT CGCGAGCCGC GGCAGCGTCG ATCGATTTCC GCTCGCGCCG
CTGCGCGATC TGCTCGAGGA GGGGCCGCGC TTCACGACCG ACCTGCGCTT TGCCGGCAAC
TGGAAGCTGC GCGCCGACGA AACGCTCGAC GGCACGCTGA GCCTGCGCCG CCAGTCGGGC
GATCTGCGGC TCGCCGAGCC TGCGCTGCAG CTGGGTCTGG AGGCGCTGCA GCTCGATCTC
GTCGCCGCCG CGAATCGCGT CGACGCGCGC CTGGCGGTCG AAAGTACGCG CGCCGGCCAG
TTGCACGCCA CGGCGCGTGC GGCACTCGTG CGCGAGGGTG CGGCGTTCAC GCTGAACCGC
GCCGCGCCGC TGGCGTGGAA TGCCCGCTTC GACGTTCCCG ATCTGCGCCT GGCCAAGGCA
TTTCTTCCGG TCGGCATCCG GCTCGACGCG CACCTCGTCG GTCGACTCGA CGGCAGCGGC
AGCATCGCCG CACCGCGCAT CGACGGCGTC GTCGACGCGC AGCAGATCCG TTTCGCGATG
CCAGAGCAAG GCGTCGCGAT CAGCGATGGC ACGCTCAGGC TCGCGCTTGC GGGGGATCGC
GTGCGCGTGC AGCAGGGCGA ATTGAAAGGC GCCGGCGGGG GCGGGCGCAT CCGCGTGAGC
GGCGAGGCGC AGCTCAGAAA TCCACAGGCG GGGCTTACGC TCGAATTCGA GAAATTCGCC
GCGATTCAGC GCAGCGACAG GCAGGTGATC GTGTCGGGCA CCACGCGGCT GGTGATCGAT
CCGCGTCACC TGGAACTCCG CGGCGAACTG ACGGCCGACC GCGCCCGGCT CGAAATGCCC
GGGGCGAGCC GGCCGATGTT GTCGGACGAC GTCGTCGTGG TCGGCCGGCC GCCGCGCGAA
AAGCCCGCCG CGCAACGGTT TCCGCTCGCG CTCGACCTGC GGCTGCGGCT CGGCAGCGAT
TTCCTGTTCG ACGGCGGGGG GCTCGACGCC CGCCTCGGCG GCGAACTGCG CGTCTTCACG
GTCGACAAGG TCGTGCGCGG CGAGGGCACG ATCCGGGTCG AGGAGGGGCG GTATTCGGCC
TACGGCCAGA CGCTTGCGAT CGAGCGCGGC GTGCTGCGCT TCGTCGGACC GATCGACAAC
CCGGGGCTTG ACGTGCTCGC GGTCCGCGTG ACGCCGGCGG TCAAGGTCGG CGTGCAGGTC
GGCGGAACCG TACAGCGCCC GCTCGTCAAG CTGTATTCGG ATCCGCCGCT GCCCGACACC
GAGAAGCTCG CCTGGCTCGT GCTCGGTCAC GGCCTCGAAG GCAGCGGGCA GGAAGAGTTC
GTGCTGATGC AGGTCGCCGC CGGCGCGCTG CTGTCGCAGG CCGAGTCGGT CAACGTGCAG
GCGAAGCTCG CCGAGACGCT CGGCATCGAC ACCTTCGACG TGCGCTCGGG CGGGGGCGAA
GACCTCACCA GCACCGTGGT CAGCCTCGGC AAGCGGCTGT CGTCGCGCGC AACCCTCAGC
TACGAGCAAA GCCTCGACGG CCTGCACCAG TTCGTCAAGG TGCTGTACCA GCTGACGCCG
CACGTGAGGC TCGAGGCGCA GGCAGGACAG CAAAGCAGTT TCGACGCGTT TTACACGCTC
GAATACGATT AG
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| Protein sequence | MKRAGWVLAG LLGLLALLLG AAATLATTAT GFRWLADAAS ALSGERLKLE GVSGHLGAPI
AVKRLTLVTQ LRRIEAEDLR LRWQPRALWE RRLEVELLAA RVVRVDVLRE DPRPPQLPAS
LRLPLDVRVH AFDLGRLEMT NAASMQIFRR LHARLDGRGD RYRVSGARVL TPWADVTGRF
ELGKDAPFAL QGSFDATRRE PLPLHARLRL AGSLAALRFE GDATAEGMSV VASGEAAPFA
EVRLRRVLLA GQGIDPRRLA PGAPTADLAF SGVFEGRAGE RLIGTFSLSN ALAGRLDQER
LPLANLSGAV FGDVAAADFR ALTVDLGAAG RFSGAGQWRN GRAVLDLVSP RVDLAALHGK
LYPTRMATRL QFAGDLARQT LDGTFSERWG EGRFALSRDA ARLRLETLQF RGRAGQLTAS
GEMQSDATRA FAARFDATRI DPAQFGKLPR ARLNLRGALS GALAPQPRLL AEFTLPTGEL
EGSPIRGHGR LRYAEGHLAD ADIDLDLAGN RATFTGAYGR AGDRLDWNVD APDLGRLKFG
LDGQLTSRGS VAGDPAAPQV EMQLAARALR LPGGVAVEHA DLALTLQATA RGAFEGRVDA
RGVRVAGQRI ATLSATLDGQ RAAHTLALDA SLPQGRLNAT LAGGLGADSV WRGQLQKAAL
QGEWPIVLTA PATLVLGRAQ QQVDGLVLSV AGGRVAIEHF SRRGTQLASR GSVDRFPLAP
LRDLLEEGPR FTTDLRFAGN WKLRADETLD GTLSLRRQSG DLRLAEPALQ LGLEALQLDL
VAAANRVDAR LAVESTRAGQ LHATARAALV REGAAFTLNR AAPLAWNARF DVPDLRLAKA
FLPVGIRLDA HLVGRLDGSG SIAAPRIDGV VDAQQIRFAM PEQGVAISDG TLRLALAGDR
VRVQQGELKG AGGGGRIRVS GEAQLRNPQA GLTLEFEKFA AIQRSDRQVI VSGTTRLVID
PRHLELRGEL TADRARLEMP GASRPMLSDD VVVVGRPPRE KPAAQRFPLA LDLRLRLGSD
FLFDGGGLDA RLGGELRVFT VDKVVRGEGT IRVEEGRYSA YGQTLAIERG VLRFVGPIDN
PGLDVLAVRV TPAVKVGVQV GGTVQRPLVK LYSDPPLPDT EKLAWLVLGH GLEGSGQEEF
VLMQVAAGAL LSQAESVNVQ AKLAETLGID TFDVRSGGGE DLTSTVVSLG KRLSSRATLS
YEQSLDGLHQ FVKVLYQLTP HVRLEAQAGQ QSSFDAFYTL EYD
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