| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0828 |
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| Symbol | |
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| ID | 3673525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 870925 |
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| End bp | 873996 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637709506 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_314586 |
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| Protein GI | 74316846 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTACG CCGAGCTGCA CTGCCTGAGC AACTTCACCT TCCTGCGCGG CGCGTCGCAT
CCGGAAGAAC TCGTCGCGCG CGCGGCCGAG CTCGGCTACG CGGCGCTGGC ATTGACCGAC
GAATGCTCGC TCGCCGGCGT CGTGCGCGCG CACACGGCGG CCAAGGCCTG CGGCATGAAG
CTGATCGTCG GCAGCGAATT CACGCTCGTC GAAGGCCTGC GCCTCGTCGT GCTCGCGACC
GACCGCGCGG GCTACGGCGC GCTTTCCGCC TTCATCACCC ATGGCCGTCG CAATGCCCTC
AAGGGCCGTT ATCGACTGGG CCTCGACGAC CTCCTCGCGA GCGGCCTGCC CGGCTGCCTC
GTCGTGCTGC TGCCCGAGCC GCTGCCGACG CTCGCGCAGG CGCGCCAGAT CGTGGCGCGC
TTCCCGCGGC GCGCCTGGCT CGCCGCCGAG CGCTTTCGCG CGTCCGACGA CGCCGCGCGC
CTCGCCGCGC TCGATGAACT GGGCGAAGCC GCCGGCCTGC CGCGCGTCGC CGCGGGCGAC
GTGCACATGC ACGTCGCGGG TCGCCGCGCG CTGCAGGACA CGCTCACCGC GATTCGACTG
GGCGTGCCGC TCGCGGAGGC CGGCGCCGCG CTTCACCCCA ACGGCGAACG CCATCTGCGC
GCGCCGTCCG ACCTCGCCAC GCTCTATCCC GCCGCCTGGC TCGCCGAGAC GCTCGTGGTC
GCCGCGCGCT GCAGTTTCTC GCTCGACGAG CTGCGCTATG AATATCCCGA GGAGCTCGTA
CCCGAAGGCG AAACGCCGAT TTCGCACCTG CGCCGGCTGA CCGAAGACGG TCTCGTCCGG
CGCTTTCCCG ACGGCCCGCC CGCCAAGGTG CGTACGCTCG TCGAGCACGA ACTCGCGCTC
ATCGAGGAAC TGCGCTACGA GCCGTATTTC CTGACCGTGC ACGACATCGT GCGCTTTGCG
CGCAGCCGCG GCATCCTCTG CCAGGGGCGC GGCTCGGCGG CCAATTCGGC GGTGTGCTAC
GCGCTCTTCA TCACCGAAGT GAACCCGGCC TGCATGGACA TGCTGTTCGA GCGCTTCATC
TCCAAGGAGC GCAACGAACC GCCCGACATC GACGTCGACT TCGAGCACGA GCGGCGCGAG
GAAGTGATCC AGTATCTGTA CACGAAATAT GGCCGCGACC GCGCCGCACT CGCCGCGACC
GTCATCACCT ACCGGCCCAA GAGCGCACTC CGGGACGTCG GCAAGGCGCT CGGCTTCGAC
CTCGATCAGG TCGACCGGCT GGCGCGGTCG ACCTCGTGGT GGGACGGCCG CAAGGTCGCG
CCGCAGCGGC TCGTCGAGGC CGGCTTCGAT CCCGCCCACC CCAAGGTCCG CCTGCTGCTC
GACCGCGTCG AGGAATTGCT CGGCTTTCCG CGCCATCTCT CGCAGCACGT CGGCGGCTTC
GTGATCGCGC GCGGCCAGCT TTCGCAACTG GTGCCGATCG AGAACGCGGC GATGCCCGAG
CGCACGATCA TCCAGTGGGA CAAAGACGAC CTCGACGCGC TCGGTCTGTT GAAAGTCGAC
GTGCTCGCGC TCGGCATGCT CTCGGCGATC CGGCGCGCGC TCGACGAACT CGGCCGGCTG
CGCGGCCGGC GCCTCGAGCT GTCGGACATC CCGTCCGAAG ACCCGGCGGT CTACGACATG
CTCGGCCGCG CCGACACCAT CGGCGTGTTC CAGATCGAGT CGCGCGCGCA GATGTCGATG
CTGCCGCGCA TGCGGCCGCG CAACTTCTAC GACCTGGTGA TCGAAGTCGC GATCGTGCGG
CCCGGCCCGA TCCAGGGCGG CATGATTCAT CCCTATCTGC GCCGTCGCCA GGGGCTCGAA
CCCGTGACCT ATCCAAGCGA GGCCGTGCGC GGCGTGCTCG AACGCACGCT CGGCGTGCCG
ATCTTCCAGG AGCAGGTCAT GCAGCTCGCG ATCGTCGCCG CGGGCTTCAC GCCGGGCGAG
GCCGATCAGG TGCGGCGTTC GATGGCGGCA TGGCGCCGGC GCGGCGGGCT CGAACACTTC
GAGCGCCGCC TCATCGACGG CATGCGCGAA CGCGGCTACG ACGAGAGCTT CGCGCAGCAG
ATCTTCCAGC AGATCCTCGG CTTCGGCGAA TACGGCTTCC CCGAGTCGCA CGCCGCGAGC
TTCGCGCTCC TGGTCTACGT CTCGGCGTGG CTCAAGCGCC ACGAGCCGGC GGCCTTCACC
TGCGCGCTGC TGAACAGCCA GCCGATGGGC TTCTACGCGC CAGCCCAGCT CGTGCAGGAC
GCGCGGCGCC ACGCCGTCGA GGTGTTGTCG GTCGACGTCA CCGCGAGCGC CTGGGACTGC
ACGCTCGAGC CGGCCGCCGG GAGTCGGAAG CCGGCACTGC GTCTCGGCCT GCGCATGGTC
AAGGGCCTCT CGCTCGAATG CGGCGCGCGC GTCGCCGCGG CGCGTGCGCA ACAGCCCTTT
GCAAGCGTCG AAGACCTCGC CCGCCGCGGC GGCCTCGCGC CACGCGACCT CAAGCATCTC
GCGCGCGCCG GCGCGCTCGC GGCCCTCTCG GGGCACCGCA GGCAGGCCGC GTGGCAGGTC
GCCGGCATCG AGCAGAACGC GCCGCTCGCC CTCGACGTGA GCGAGGACGT CCAGCCCGAG
CTGCTTCCGC TGAGCGAAGG CCAGGACGTC GCCGCCGACT ACGCGGCCCT CGGACTCACG
CTTGGCCGCC ATCCGCTGGC GCTCTTGCGC CCGCTGCTGG CGCGGCGCCG GCTCGCCCCG
GCCGAAGCCC TGGGCAGGCT GGCGCACGGC CGCTTCGCGT GCACGGCCGG ACTCGTCGTC
ACGCGGCAGC GCCCGGGCAC GGCGAGCGGC GTGACCTTTC TAACGCTCGA GGACGAGACC
GGGCCGACCA ACGTCATCGT CTGGCGCGAC CTCGCCGAAC GGCAGCGGCG CGAACTGCTG
GGCGCACGGC TGCTGGCGGT GTATGGTGTG CTCGAACGCC AGGGCGAGGT CGTGCATCTC
GTCGCCGGCC GCCTGCAGGA CCTGACCCCG CTGCTCGGCC GCCTTGTGAC GCATTCGCGC
GACTTTCACT GA
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| Protein sequence | MPYAELHCLS NFTFLRGASH PEELVARAAE LGYAALALTD ECSLAGVVRA HTAAKACGMK
LIVGSEFTLV EGLRLVVLAT DRAGYGALSA FITHGRRNAL KGRYRLGLDD LLASGLPGCL
VVLLPEPLPT LAQARQIVAR FPRRAWLAAE RFRASDDAAR LAALDELGEA AGLPRVAAGD
VHMHVAGRRA LQDTLTAIRL GVPLAEAGAA LHPNGERHLR APSDLATLYP AAWLAETLVV
AARCSFSLDE LRYEYPEELV PEGETPISHL RRLTEDGLVR RFPDGPPAKV RTLVEHELAL
IEELRYEPYF LTVHDIVRFA RSRGILCQGR GSAANSAVCY ALFITEVNPA CMDMLFERFI
SKERNEPPDI DVDFEHERRE EVIQYLYTKY GRDRAALAAT VITYRPKSAL RDVGKALGFD
LDQVDRLARS TSWWDGRKVA PQRLVEAGFD PAHPKVRLLL DRVEELLGFP RHLSQHVGGF
VIARGQLSQL VPIENAAMPE RTIIQWDKDD LDALGLLKVD VLALGMLSAI RRALDELGRL
RGRRLELSDI PSEDPAVYDM LGRADTIGVF QIESRAQMSM LPRMRPRNFY DLVIEVAIVR
PGPIQGGMIH PYLRRRQGLE PVTYPSEAVR GVLERTLGVP IFQEQVMQLA IVAAGFTPGE
ADQVRRSMAA WRRRGGLEHF ERRLIDGMRE RGYDESFAQQ IFQQILGFGE YGFPESHAAS
FALLVYVSAW LKRHEPAAFT CALLNSQPMG FYAPAQLVQD ARRHAVEVLS VDVTASAWDC
TLEPAAGSRK PALRLGLRMV KGLSLECGAR VAAARAQQPF ASVEDLARRG GLAPRDLKHL
ARAGALAALS GHRRQAAWQV AGIEQNAPLA LDVSEDVQPE LLPLSEGQDV AADYAALGLT
LGRHPLALLR PLLARRRLAP AEALGRLAHG RFACTAGLVV TRQRPGTASG VTFLTLEDET
GPTNVIVWRD LAERQRRELL GARLLAVYGV LERQGEVVHL VAGRLQDLTP LLGRLVTHSR
DFH
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