Gene Tbd_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0807 
Symbol 
ID3673504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp848823 
End bp850436 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content69% 
IMG OID637709485 
ProductNH(3)-dependent NAD(+) synthetase 
Protein accessionYP_314565 
Protein GI74316825 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG0171] NAD synthase
[COG0388] Predicted amidohydrolase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.148145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCG CCCTCGCGCA GTTCAATTTC ACGGTCGGCG ACATCGCCGG CAACGCCGCG 
AAGCTGCTCG ACGCCGCGCA GGCTGCGCAC GCGGCCGGTG CGGCGCTGCT GCTGACGCCG
GAGATGTCGA TTTGCGGCTA CCCGGCCGAA GACCTCGTCT GCCGGCGCGA TTTCACTGCG
GCGTGCGCGG CGGCGGTCGA GAGCCTGGCC CGGCAGGCGC CCGCCGAACT CGCGCTCATC
GTCGGTTACC CCGAGCGCAC CGCGGCGGGT GTCTACAACG CCGCGGCACT CCTGCGCGGC
GGCCGCATCG AGCAGGTCTA CCGCAAGCAT CATCTGCCGA ACCATTCGGT CTTCGACGAG
CAACGGGTTT TCTGCCGCGG TGACGACGCC TGCGTGTTCG AGTGCGCGGG GATACGCTTC
GGCATCAACA TCTGCGGCGA CATCTGGGAG CCCGGTCCCG CCACCGGGGC GATGGAAGCC
GGCGCCGACT GGCTCCTGGT GCTGAACGCC TCGCCCTACC ATCTGAGCAA GGAGCGTGAC
CGCATCGCGG TCGCGCGGGC GCGGCAGATC GAAACGCGTC TGCCGATGGT CTACGCCAAC
CTCGTCGGCG GTCAGGACGA ACTCGTGTTC GACGGCGCCT CGTTCGTGTT CGACGCCGAC
GGCGAAGTCG CCGTGCAATG CCCCGCGTGG CGCGAAGGCC TGTTCTATCT CGAACTCGAC
GCCGACGGCT GCAGCGGGCC GCGACATGAA TTGCCCGGCG AGGAGGCCGC GGTGTACGAG
GCGCTCGTGC TCGCCGTGCG CGACTACGTC GGCAAGAACG GCTTCCGCGG CGTGCACCTG
GGGCTCTCCG GCGGCATCGA TTCGGCGCTC ACGCTTGCGA TCGCGGCCGA CGCGGTCGGC
GCCGAGCGCG TGCACGCGGT CATGATGCCG TCGGACTACA CGGCCGGGAT CAGCGTCGAG
GACTCGCGCG AGATCGTCGA GCGGCTCGGC GTCCGCTACG CCGAAATCGC GATCGGACCG
ATCGTCGAGG CATTCACGGG TCAACTGGCA GGCGAGTTTG CGGGGCTCGC GAGCGACACG
ACCGAGGAAA ACCTGCAGGC GCGCGCCCGC GGCACGCTGC TGATGGCGCT CTCCAACAAG
TTCGGCACGC TGGTGCTGAC GACCGGCAAC AAGAGCGAAA TGGGGACCGG TTACGCGACG
CTCTACGGCG ACATGGCCGG CGGCTTCGCC GTGTTGAAGG ACGTCGCCAA GACGCGCGTC
TACCGGCTCG CGAACTACCG CAACAGCGTG TCGCCGGTGA TCCCGCAGCG CATCATAGAC
CGTCCGCCGT CGGCCGAACT GCGCCCCGAC CAGACCGACC AGGACAGCCT GCCGCCTTAC
GAGGTGCTCG ACGCGATCCT CGCCGCCTAC GTCGAGCGCG ATCTGCCGGC GCGCGAGATC
GTCGCGCAGG GCCACGACGC CGCGGTCGTG AAGAAGGTCA TCCGCATGGT CGACCTCGCC
GAATACAAGC GCCGCCAGTC GCCGCCCGGC CCGCGCATCA CGCCGCGCAA TTTCGGCAAG
GATCGCCGCT ATCCGATCAC CTCGAAATAC CGTCCTGAAG GAGAACTGCC GTGA
 
Protein sequence
MKLALAQFNF TVGDIAGNAA KLLDAAQAAH AAGAALLLTP EMSICGYPAE DLVCRRDFTA 
ACAAAVESLA RQAPAELALI VGYPERTAAG VYNAAALLRG GRIEQVYRKH HLPNHSVFDE
QRVFCRGDDA CVFECAGIRF GINICGDIWE PGPATGAMEA GADWLLVLNA SPYHLSKERD
RIAVARARQI ETRLPMVYAN LVGGQDELVF DGASFVFDAD GEVAVQCPAW REGLFYLELD
ADGCSGPRHE LPGEEAAVYE ALVLAVRDYV GKNGFRGVHL GLSGGIDSAL TLAIAADAVG
AERVHAVMMP SDYTAGISVE DSREIVERLG VRYAEIAIGP IVEAFTGQLA GEFAGLASDT
TEENLQARAR GTLLMALSNK FGTLVLTTGN KSEMGTGYAT LYGDMAGGFA VLKDVAKTRV
YRLANYRNSV SPVIPQRIID RPPSAELRPD QTDQDSLPPY EVLDAILAAY VERDLPAREI
VAQGHDAAVV KKVIRMVDLA EYKRRQSPPG PRITPRNFGK DRRYPITSKY RPEGELP