Gene Tbd_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0716 
Symbol 
ID3673807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp755542 
End bp756303 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID637709394 
Productputative aldolase 
Protein accessionYP_314474 
Protein GI74316734 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0565774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGA CCAATCGCCT CAAACGCGCG CTCGCCGACG GCAAGTCCGT GTTCGGCCTG 
CTCAATTCGA TTCCGTCGCC GCTCGTCGTC GAAATGATCG GCTACGCCGG ATTCGATTTC
GTCGTCCTCG ACATGGAACA CGTCTGCGTC AATCCGGAGA CGCTCGAAAA CATGGTACGC
GCGGCCGAAT GCGCCGGCAT CACGCCGCTG GTCCGCGTAC CAAGTGCCGC GCCCGACGTC
ATCCTGCGCG CGCTCGACTG CGGCGCGCAG GGCGTCGTCG TGCCGCACGT GCAGAGCGCG
GCCGAAGCGG CGCAGGCCGT CGCCGCGAGC CGCTACGCGC CGCTCGGCAC GCGCGGCATC
AGCGGCGGCC GCACGACCGG CTTCGGCACC ACCGATCTGG CGGCTTATCT CGCGCGCGCC
AACGCGGAAA TCATGGTCGT CGCGATGATC GAAGACCGCG CGGGCGTCGA CGCCAGTGAC
GCGATCCTGT CGGTTGCCGG CATCGACATG GTTCTCGAAG GCGCGATCGA CCTGTCTCAA
TCCTACGGCG TGCCGGGACA GGCGCAGCAC CCGATCGTGC AGGAAGCGAT CGCGAAGGTT
GCGGCCGCGT GTGCCGCGCG CGGCGTTCCG TTTTGCGCGA TCCCGCGCGT CGCCGAGCAG
ACGGCCGCCT GGAAAGCGCG CGGCGTGCAG GCGTATCTGC TCGGCGACGA CCGCGGCGTG
AGCTTCCGCG CGCTCAAGGC GCATCTCGCG GCCTTCCGCT GA
 
Protein sequence
MLQTNRLKRA LADGKSVFGL LNSIPSPLVV EMIGYAGFDF VVLDMEHVCV NPETLENMVR 
AAECAGITPL VRVPSAAPDV ILRALDCGAQ GVVVPHVQSA AEAAQAVAAS RYAPLGTRGI
SGGRTTGFGT TDLAAYLARA NAEIMVVAMI EDRAGVDASD AILSVAGIDM VLEGAIDLSQ
SYGVPGQAQH PIVQEAIAKV AAACAARGVP FCAIPRVAEQ TAAWKARGVQ AYLLGDDRGV
SFRALKAHLA AFR