Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0635 |
Symbol | |
ID | 3672600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 673709 |
End bp | 675079 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637709307 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_314393 |
Protein GI | 74316653 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.603744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCGA CCCCCCTCGA ATTGCTCCAG AAATACAGCG TGCCCGGGCC GCGTTATACG TCCTACCCGA CCGCGCCCTA TTTCCACACC GGCTTCGGCG AGACCGACTG GCGCGAGGCG CTCGCGCGCG CGCGCAGCGA TCGCGCCTTG TCGCTGTACG CGCACGTGCC GTTCTGCGAC TCGCTCTGCT ACTACTGCGG CTGCAACATG GTCGCGACGC GGGACTACAG CAAGACCGTT CCCTATCTTG CCGCGATCGA GCGCGAAATG GAGCGCACGG CCGCCCTGGT CGACCCGGGC CGGGTCGTGC GCCAGCTGCA CTGGGGCGGC GGCACGCCGA CCTACCTCAA CCCCGACGAC ATCCGCCGCC TGATGGCGAT GATGCAGCGC AATTTCACGA TTGCGCCCGA CGCCGAGATC AGCTGCGAGG TCGATCCGCG CGAACTGACC TACGAGCATC TGGCGGCCTT GCGCGAGACC GGCTTCAATC GACTGTCGTT CGGCGTGCAG GACATGGACT CCGACGTGCA GCAGGCGGTC AACCGCATCC AGTCCGAATT CCTCATCCGC CAGGTGCTCG ACTGGGCGCG CGAACTCGGT TTTTCGAGCA TCAACCTCGA CCTGATCGTC GGCCTTCCGA AACAGACCGT CGAGAGCTTC AGCCGCACGC TTGAGCGCGT CACGAACTGG GCGCCCGACC GCCTCGCGGT CTTCGCCTAT GCGCACGTGC CTTGGATCAA GAAGCACCAG AACCTGATCA ACGAGGCCGA CCTTCCCGAC GCCGCCACAC GGCTCGGCCT GCAGCAGGCC GTGAACGACG CGCTCGCCGC GGCCGGCTAC GTCAATATCG GACTCGACCA TTTCGCGCGG CCCGAGGACG AGCTCGTGCG CGCGCAGCAG AACAAGACGC TGTGGCGGAA TTTCCAGGGC TACACGACGC ACAAGGACTG CGACATCCTG GCCTTCGGCG TATCGAGCAT CAGCCAGACC GACGATGTCT ACATGCAGAA CGACAAGAAT CTCAAGCGCT ACCAGGATCG CGCGGCTGCG AACGGCTTCG CGGTCGAGCG CGGGCTGAGG CTCACGCGCG ACGACCAGGT CCGTCGCGAC GCGATCACGC GCGTGATGTG CGACCTCGAA CTCGATTTCG CCGCCTTTGG GAAGGAATGG GACGTCAGCT TCGGCGACTA CTTCGCCGAC GCCCTGGTCC AGCTACGCCC GCTGGCCGAC GACGGTCTGG TCGACATCGC GGCGGACCGG ATCAGCGTCA CCGCGACGGG CCGCCTTTTC CTGCGCAACA TCGGCATGTG CTTCGACCGC TACCTCAAGG AGGCGGCCGG TGAGCGGCCG CGCTATTCCC GCACGGCCTG A
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Protein sequence | MSSTPLELLQ KYSVPGPRYT SYPTAPYFHT GFGETDWREA LARARSDRAL SLYAHVPFCD SLCYYCGCNM VATRDYSKTV PYLAAIEREM ERTAALVDPG RVVRQLHWGG GTPTYLNPDD IRRLMAMMQR NFTIAPDAEI SCEVDPRELT YEHLAALRET GFNRLSFGVQ DMDSDVQQAV NRIQSEFLIR QVLDWARELG FSSINLDLIV GLPKQTVESF SRTLERVTNW APDRLAVFAY AHVPWIKKHQ NLINEADLPD AATRLGLQQA VNDALAAAGY VNIGLDHFAR PEDELVRAQQ NKTLWRNFQG YTTHKDCDIL AFGVSSISQT DDVYMQNDKN LKRYQDRAAA NGFAVERGLR LTRDDQVRRD AITRVMCDLE LDFAAFGKEW DVSFGDYFAD ALVQLRPLAD DGLVDIAADR ISVTATGRLF LRNIGMCFDR YLKEAAGERP RYSRTA
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