| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0577 |
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| Symbol | valS |
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| ID | 3673687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 605816 |
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| End bp | 608554 |
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| Gene Length | 2739 bp |
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| Protein Length | 912 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637709248 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_314335 |
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| Protein GI | 74316595 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.113426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCG CCAAATCCTT CGAACCCGCT GAAATCGAAA AGCGCTGGTA CGCCCGCTGG
GAAAGTGCCG GCTACTTCAA GGCGAGGGAC AAGCCCGATG CGCCCGCGTA CTGCATCATG
CTGCCGCCGC CCAACGTGAC CGGCACGCTG CACATGGGCC ACGCCTTCCA GCACACGCTG
ATGGACGCAT TGACCCGCTA CCACCGCATG TCGGGCGACA ACACCCTGTG GCAGCCTGGC
ACCGACCATG CAGGCATCGC CACGCAGATC GTGGTGGAGC GTCAGCTCGA TGCGCAGAAC
ATCTCGCGCC ACGACCTTGG ACGCGAAAAA TTCCTCGAAA AAGTCTGGGA ATGGAAAGCG
CATTCCGGCT CCACCATCAC GCGGCAGATG CGCCGGCTCG GCACCAGCCC CGACTGGAGC
CGCGAGCGCT TCACCATGGA TGCCGGGCTG TCGAAGGCGG TCACCGAAGT CTTCGTGCGG
CTCTATCGCG AAGGCCTGAT CTACCGCGGC AAGCGGCTGG TGAACTGGGA TCCGGTGCTC
GGAACGGCTG TGTCCGACCT TGAGGTCGTC AGCACCGAGG AAGACGGCTT CATCTGGGAA
ATCAACTATC CGCTGGAAGA TGGCAGCGGT CACCTGACCG TGGCCACCAC GCGCCCGGAA
ACCCTGCTCG GCGACACCGC GGTCGCCGTG CATCCCGAGG ATGAGCGCTA TGCGCACCTC
ATCGGCAAGC ACGTGCGCCT GCCGATCGCC GAGCGCAGTA TTCCCGTCAT CGCGGATGAG
TACGTCGATC GCGAGTTCGG CACGGGCGTA GTGAAGATCA CCCCTGCGCA CGACTTCAAC
GACTGGCAGG TCGGGCAACG CCACAAGCTC ATGGCAATCA GCGTCCTCAC GCTCGACGCC
AAAATGAACG AGCTCTGCCC CACCGAATAC CAGGGACTCG ACCGCTATGA CGCGCGCCAG
ACGCTGCTCG ACGCACTGCA GGCGAAGGGC CTGCTGGTCT CGGCCAAGCC GCACAAGCTG
ATGATCCCGC GCGGCGACCG CACCCACGCC GTGCTCGAAC CGATGCTCAC CGACCAGTGG
TTCATGAGCA TGGAAGGCCT GGCCAAGCAA GGGCTCGCCG CGGTCGACTC GGGCGAACTG
AAATTCGTGC CGGAAAACTG GACCACCACC TACCGGCAGT GGCTGGAAAA CATCCAGGAC
TGGTGTGTTT CGCGCCAGCT GTGGTGGGGC CATCGCATCC CGGCGTGGTA CGACGCCGAC
GGCGAGTTCT ACGTCGCGCA CACCGAGGAA GAAGCAAGGA AGCAGGCCGG CGGCCGCGAA
CTGACGCAGG ACAACGACGT GCTCGATACC TGGTTCTCCA GCGCGCTGTG GCCCTTCTCG
ACGTTGGGCT GGCCCGAGCA GACGCCGGAA CTGGAGCGCT ACCTGCCGAC TTCGGTGCTG
GTCACCGGCT TCGACATCAT CTTCTTCTGG GTTGCCCGCA TGGTGATGAT GTCGAAGCAC
CTTACCGGCA AGGTCCCATT CCGCGAGGTG TACGTCACCG GCCTGGTGCG CGACTCTGAA
GGCCAGAAGA TGAGCAAGTC GAAGGGCAAC GTGCTCGACC CGATCGATCT CATCGACGGC
ATCGCCGTAG GCGACCTCGT CGCCAAGCGC ACCCAGGGTC TGATGAACCC CAAGCAGGCC
GCCAGCATCG AGAAACGCAC CCGCAAGGAG TTCCCCGATG GCATCGCCGC CTACGGTACC
GACGCCCTGC GCTTCACGTT TGCTTCGCTC GCCACTCACG GGCGCGACAT CAAGTTCGAC
CTGCAGCGCG CCGAGGGCTA CCGCAACTTC TGCAACAAGC TGTGGAACGC CACCCGTTTC
GCGCTGATGA ACCTGGAAGG CCACGACTGC GGGCAGGAAG CCGACCAGCC GATGGATTTC
TCCGATGCGG ACCGCTGGAT CGCCGCACGT CTGCAACAGG CCATCGGCGA CGTGCATGAG
GCCTTCGCCG CTTACCGCTT CGACCAGGCG GCGCGCGCGG TCTACGAATT CGTGTGGGAC
GAATACTGCG ACTGGTATCT GGAACTCGCC AAGGTGCAGT TGAACCATGG GACGCCCGAA
CAGCAGCGCG CCACTCGCCG CACCCTGGCC ACCGTGCTTG AAACCACGCT GCGCCTCGCT
CACCCCATCA TCCCCTTCAT CACCGAGGAA CTGTGGCAGA AGGTCGCGCC GCTGGCCGGC
GTGCACGGCG ACAGCATCAT GCTGTCTGCC TATCCGCAGG TCGATGAAGC ACAACGCCAT
CCCGGCAGCG TCGCGCGGAT GCAATTGCTG AAGGAACTGG TCAACGCCTG CCGCACCCTG
CGCGGTGAAA TGAATCTGTC ACCCGCCCAG CGCGTGCCGC TGGTAATCGA AGGCGATGCC
GCCGTAATCA ACACGCTGGC GCCCTACATG GTTGCGCTGG GCAAGCTTGG CGAAGTCAGC
GCGGTGACCG CGCTGCCGGA AGCCGACGCC CCCGTCGCGC TGGTCGGCGA CATGCGGATG
ATGCTGGTGG TGGAAATCGA CAAGGACGCC GAACGTGCAC GGCTCGCCAA GGAGATCGCC
CGTATCCAGG GCGAGATCAG GAAGGCGGAA ACCAAGCTCG CCAACCCCAG CTTCGTCGAC
AAGGCCCCGG CGGCGGTGGT GCAGCAGGAG CAGGCGCGGC TAGCCGATTT TGCGGCCATG
TTGCAGAAAC TGGAGGCGCA GCACGCGCGG CTGGGCTGA
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| Protein sequence | MELAKSFEPA EIEKRWYARW ESAGYFKARD KPDAPAYCIM LPPPNVTGTL HMGHAFQHTL
MDALTRYHRM SGDNTLWQPG TDHAGIATQI VVERQLDAQN ISRHDLGREK FLEKVWEWKA
HSGSTITRQM RRLGTSPDWS RERFTMDAGL SKAVTEVFVR LYREGLIYRG KRLVNWDPVL
GTAVSDLEVV STEEDGFIWE INYPLEDGSG HLTVATTRPE TLLGDTAVAV HPEDERYAHL
IGKHVRLPIA ERSIPVIADE YVDREFGTGV VKITPAHDFN DWQVGQRHKL MAISVLTLDA
KMNELCPTEY QGLDRYDARQ TLLDALQAKG LLVSAKPHKL MIPRGDRTHA VLEPMLTDQW
FMSMEGLAKQ GLAAVDSGEL KFVPENWTTT YRQWLENIQD WCVSRQLWWG HRIPAWYDAD
GEFYVAHTEE EARKQAGGRE LTQDNDVLDT WFSSALWPFS TLGWPEQTPE LERYLPTSVL
VTGFDIIFFW VARMVMMSKH LTGKVPFREV YVTGLVRDSE GQKMSKSKGN VLDPIDLIDG
IAVGDLVAKR TQGLMNPKQA ASIEKRTRKE FPDGIAAYGT DALRFTFASL ATHGRDIKFD
LQRAEGYRNF CNKLWNATRF ALMNLEGHDC GQEADQPMDF SDADRWIAAR LQQAIGDVHE
AFAAYRFDQA ARAVYEFVWD EYCDWYLELA KVQLNHGTPE QQRATRRTLA TVLETTLRLA
HPIIPFITEE LWQKVAPLAG VHGDSIMLSA YPQVDEAQRH PGSVARMQLL KELVNACRTL
RGEMNLSPAQ RVPLVIEGDA AVINTLAPYM VALGKLGEVS AVTALPEADA PVALVGDMRM
MLVVEIDKDA ERARLAKEIA RIQGEIRKAE TKLANPSFVD KAPAAVVQQE QARLADFAAM
LQKLEAQHAR LG
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