Gene Tbd_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0562 
Symbol 
ID3673672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp590865 
End bp591290 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID637709233 
Productnitric-oxide reductase subunit C 
Protein accessionYP_314320 
Protein GI74316580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000244582 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.667506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGG CATTCACAAA ATCCGCAGCC CGCAACATCT TCTACGGCGG CGCGGTGTTC 
TTCTTCCTGT TGTTCATCGG CCTGACCTTC GACACGATGA CGACGCTTCC CAAACGCGAC
AACCGAGCCA ATCTGACCGA CTCGGCCTTG CGCGGCAAGC ACATCTGGGA GACGCGCAAC
TGCATCGGCT GCCACACCCT GATGGGTGAA GGTGCCTATT TCGCGCCCGA GCTCGGAAAC
GTCTACGCGC GGCGCGGTCC CGACTTCATC AGGACCTGGA TGAAGATCCA GCCGAGCGGG
GCACCCGGCC GTCGCCAGAT GCCGAACTTC CAGCTGACCG ACGCGCAGCT CGACGACCTC
GTCGCCTTCC TGAAATACGC CTCCGAGGTG AACACCTCGA AATGGCCGCC AAACATCGAG
GGTTGA
 
Protein sequence
MSSAFTKSAA RNIFYGGAVF FFLLFIGLTF DTMTTLPKRD NRANLTDSAL RGKHIWETRN 
CIGCHTLMGE GAYFAPELGN VYARRGPDFI RTWMKIQPSG APGRRQMPNF QLTDAQLDDL
VAFLKYASEV NTSKWPPNIE G