| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0438 |
|---|
| Symbol | |
|---|
| ID | 3671705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 458977 |
|---|
| End bp | 459450 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637709104 |
|---|
| Product | single-strand binding protein |
|---|
| Protein accession | YP_314196 |
|---|
| Protein GI | 74316456 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0629] Single-stranded DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.367584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCCG TCAACAAAGT CATCCTGGTC GGCAATCTCG GACGCGACCC CGAGATGCGC
TACCTGCCGA GCGGAGAGGC CGTCGCCAAC CTCGCGATCG CGACGACCGA CAAATACAAG
GACAAGAGCG GCCAGATGGT CGAGCAGACC GAGTGGCACC GCGTCAGTTT CTTCGGCCGT
ACCGCCGAGG TGTGCGGGCA GTACCTGAAA AAGGGTTCGC AGGTCTACGT CGAAGGCTCG
ATCCGCACGC GCAAGTACAC CGACAAGGAA GGCGTCGAGA AATACGCGAC CGAGATCCGC
GGCGACCGGA TGCAGATGCT GGGTAGCCGC AGCGGTGGCG GGGGTGTGGC CGACATGGAC
GACGGCTTCA ACCAGGCGCC GCAGCGCAGC CAGCCGCGTG GCAACGCCCC CGCCGGCTCG
CAGCGCCCGG CGAGCAGCGG ATTCGACGAC ATGGACGACG ATATTCCGTT CTGA
|
|---|
| Protein sequence | MASVNKVILV GNLGRDPEMR YLPSGEAVAN LAIATTDKYK DKSGQMVEQT EWHRVSFFGR
TAEVCGQYLK KGSQVYVEGS IRTRKYTDKE GVEKYATEIR GDRMQMLGSR SGGGGVADMD
DGFNQAPQRS QPRGNAPAGS QRPASSGFDD MDDDIPF
|
|---|
| |