| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0393 |
|---|
| Symbol | |
|---|
| ID | 3671660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 421199 |
|---|
| End bp | 421762 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637709059 |
|---|
| Product | transcription antitermination protein nusG |
|---|
| Protein accession | YP_314151 |
|---|
| Protein GI | 74316411 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0250] Transcription antiterminator |
|---|
| TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00772348 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTGGT ACGTGGTTCA TGCCTACTCC GGCTTCGAGA AAAGCGTGGC GCGCGCGCTG
GAAGAGCGGA TCGAGCGCGC CGGGATGCGC GACCGTTTCG GCGTCATCGT CGATGAAAAA
ACCGGCAAGC CGCGCCCCGC GATCATGGTG CCAGTCGAGG AAGTCGTCGA GATGAGGGCG
GGACAGAAAA AGACCGCCGA GCGCAAGTTC TTCCCGGGTT ACGTCCTCGT GCAGATGGAG
ATGGACGACG ACACCTGGCA CCTGGTCAAG AGCACGCCCA AAGTCACCGG TTTCGTCGGC
GGCACGGCAA CCAAGCCGGC GCCGATCTCG GAAAAGGAAG TCCAGGCGAT TCTCGACCAG
ATGCGCGAAG GCGTCGAGAA GCCCAAGCCC AAGGTGTTGT TCGAGGTCGG CGAGCAGGTC
CGCGTCATCG ACGGGCCGTT CACCGATTTC AACGGCAACG TCGAGGAAGT GAATTACGAC
AAGAGCAAGC TACGCGTGTC GGTCATGATT TTCGGCCGGG CGACGCCCGT CGAACTGGGT
TTCGGCCAGG TCGAAAAGAG CTGA
|
|---|
| Protein sequence | MRWYVVHAYS GFEKSVARAL EERIERAGMR DRFGVIVDEK TGKPRPAIMV PVEEVVEMRA
GQKKTAERKF FPGYVLVQME MDDDTWHLVK STPKVTGFVG GTATKPAPIS EKEVQAILDQ
MREGVEKPKP KVLFEVGEQV RVIDGPFTDF NGNVEEVNYD KSKLRVSVMI FGRATPVELG
FGQVEKS
|
|---|
| |