Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0390 |
Symbol | |
ID | 3671653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 417818 |
End bp | 418909 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637709052 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | YP_314148 |
Protein GI | 74316408 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.997224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0213751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTCA AATGCGGCAT CGTTGGCTTG CCCAACGTCG GAAAATCCAC CCTGTTCAAC GCGCTGACCC AGGCGGGCAT CGCGGCGGAA AACTACCCGT TCTGCACCAT CGAGCCGAAC ACGGGCGTCG TCGAGGTGCC GGACCCGCGG CTCGACGAGC TCGCGAAGGT CGTCAAGCCG CAGCGCGTCG TTCCTGCGAT CGTCGAGTTC GTCGACATCG CGGGCCTGGT CGCCGGGGCA TCGAAGGGCG AGGGCCTCGG CAACCAGTTT CTCGCCAACA TTCGGGAGAC CGACGCGATC TGCCACGTCG TGCGCTGTTT CCATGACGAA AACGTGATCC ACGTCGCCGG CAAGGTCGAC CCGCTGTCCG ACGTCGAGAC GATCGCGACC GAACTCGCGC TCGCCGATCT CGCGAGCGCC GAAAAAGCAC TGGCCCGTTA CGAGAAACCC GCCCGTGCCG GAGACAAGGA GGCGCAGCAC ATGGTCGCGG CGCTGAAACC GGTCGTCGCG GCGCTAAACG AGGGTCGCCC GGCGCGCGCC GCCGGCCTCG ACGCCGAAGG GCTCGCGCGC ATCAAGCCGC TGTGCCTGAT GACCGTCAAG CCGACGCTCT ATGTCGCCAA CGTCGACGAG GACGGCTTCC ACGACAATCC GCTGCTCGAC GCCCTGACTG CCTTTGCGGA AAAAGAGGGC GCCCCGGTGG TGCCGGTCTG TGCCGCGCTC GAAGCCGAAC TGCAGGAGCT TTCGCCGGAG GAGCGCGTGG AATACCTGAA CGAGCTCGGC TGGGACGAGC CCGGTCTCAA TCGCCTGATA CGCGCGGCCT ACGCGCTGCT CGGTCTGCAG ACCTATTTCA CGGCCGGCGT GAAGGAGGTG CGGGCGTGGA CGATCCACAA GGGCGACACC GCACCGCAGG CGGCCGGCGT CATCCACACC GACTTCGAGC GGGGCTTCAT CCGCGCGCAG ACCATTTCCT TCGACGACTT CATCGCCTGC CAGGGCGAGC AGGGCGCGAA GGAGGCCGGC AAGATGCGCG CCGAGGGCAA GGAATACGTC GTCAAGGACG GCGACGTGCT CAATTTCCTG TTCAACGTCT GA
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Protein sequence | MSLKCGIVGL PNVGKSTLFN ALTQAGIAAE NYPFCTIEPN TGVVEVPDPR LDELAKVVKP QRVVPAIVEF VDIAGLVAGA SKGEGLGNQF LANIRETDAI CHVVRCFHDE NVIHVAGKVD PLSDVETIAT ELALADLASA EKALARYEKP ARAGDKEAQH MVAALKPVVA ALNEGRPARA AGLDAEGLAR IKPLCLMTVK PTLYVANVDE DGFHDNPLLD ALTAFAEKEG APVVPVCAAL EAELQELSPE ERVEYLNELG WDEPGLNRLI RAAYALLGLQ TYFTAGVKEV RAWTIHKGDT APQAAGVIHT DFERGFIRAQ TISFDDFIAC QGEQGAKEAG KMRAEGKEYV VKDGDVLNFL FNV
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