| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0297 |
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| Symbol | |
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| ID | 3672083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 317764 |
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| End bp | 319050 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637708958 |
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| Product | hypothetical protein |
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| Protein accession | YP_314055 |
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| Protein GI | 74316315 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | [TIGR03097] probable O-glycosylation ligase, exosortase system type 1-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.515931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGATA TTTTCGTCGT AAGCGTCATT TTCGGGTTGC TGCCTTTCGT CCTCAGACGT
CCCTGGCTCG GCATCCTGCT CTGGTCGTGG CTCGGCTACA TGAACCCGCA CCGGCTGGCC
TGGGGCTTCG CCTACAACCT GCCGTTTTCG ATGATCGTCG GCCTCGTCAC GATCGCCGCC
TTCATGGCGT CGAAGGAAAA GAAGGAGATG CCGTGGACGC GGGAGACGAT TTTTCTCCTG
ATCTTCGTCG CCTGGATGCT CTTCACGACG CTCTTCGCGT TCTATCCCGA CGTCGCCTGG
ATGCAGTGGG ACAAGGTGTG GAAGATCCAG CTCATGATCT TTCTCACCGC GCTCATCATC
AACGATCGCG ACAAGCTGCA CTGGCTGCTC TGGGTGATCG TGCTGTCCTT CGGTTTCTAC
GGGATCAAGG GCGGCATCTT CACGATCATC AACGGCGGAG CCTACCGCGT GCAGGGGCCG
AGCGAGACCT TCATCACGGG CAACAACGAA CTCGCGCTGG CGCTCGTGAT GACCATCCCG
TTGATCCGCT ACCTGCATCT GCAGGACACC CGCAAGTGGA TGAAGACCGG GCTCGCCGCC
GCGATGGTCC TGACCGGCGT CGCGGCGATC GGCAGCCAGT CGCGTGGCGG ACTCGTGGCG
ATGGTCGCGA TGGGTATCTT TCTCTGGCTC AAGAGCCGCA ACAAGATCGT GACCGGCCTC
TACATGGCCG TCGCGGTCGG CATCATCGCG GCGGTCATGC CGCAGGAATG GTACGACCGC
ATGAACACGA TCAACACCTA CCAGGACGAC CAGTCGGCGC AGGGTCGGAT CAACGCCTGG
CACACCGCGT TCAACGTCGC CAAGGACCGC GTCACCGGCG GCGGCTTCGA GATGTGGCGG
CCGCCCGTGT TCCGCCAGTA CGCGCCGGAT CCCTACAACG TGCGCGACGT GCACAGCATC
TATTTCGAGA TCATGGGCGA GCAGGGGTTC ATCGGCTTCG CGCTGTTCAT GCTGCTCGGG
CTCCTGGCCT GGCTGCGCGC GCAGCAGATC ATCAAGCGCT GCAAGAAAGA TCCGGACAAG
AAATGGGCCG CCGATCTGGC CGCGATGATC CAGGTCAGCC TGATCGGCTA CGCGGCAGGC
GGCGCCTTCC TCGGCATGGG CTATTTCGAC CTGCCCTACC ACCTGATGGT CATTCTGGTG
CTGGTCGCCA AATTCTCCGG CGTGCTGCAG AAACAGCCGG TGCCCGTGGG GGGATTCGGC
AAGCGGCGCG AGGCCGCGGC GGGGTAG
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| Protein sequence | MRDIFVVSVI FGLLPFVLRR PWLGILLWSW LGYMNPHRLA WGFAYNLPFS MIVGLVTIAA
FMASKEKKEM PWTRETIFLL IFVAWMLFTT LFAFYPDVAW MQWDKVWKIQ LMIFLTALII
NDRDKLHWLL WVIVLSFGFY GIKGGIFTII NGGAYRVQGP SETFITGNNE LALALVMTIP
LIRYLHLQDT RKWMKTGLAA AMVLTGVAAI GSQSRGGLVA MVAMGIFLWL KSRNKIVTGL
YMAVAVGIIA AVMPQEWYDR MNTINTYQDD QSAQGRINAW HTAFNVAKDR VTGGGFEMWR
PPVFRQYAPD PYNVRDVHSI YFEIMGEQGF IGFALFMLLG LLAWLRAQQI IKRCKKDPDK
KWAADLAAMI QVSLIGYAAG GAFLGMGYFD LPYHLMVILV LVAKFSGVLQ KQPVPVGGFG
KRREAAAG
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