Gene Tbd_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0294 
Symbol 
ID3672080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp314050 
End bp315291 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content72% 
IMG OID637708955 
Productglycosyl transferase, group 1 
Protein accessionYP_314052 
Protein GI74316312 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGAAG CGCGCGGCGG CGGCGCCGAG ATCGTCGTGT TCAGTTCGCT GTTCCCGAGC 
GCGGCACGCC CGGGTGCCGG GCTTTTCATC CGCGAGCGCA TGTTCCGCGT CGCGCAGCGT
CGCCGGCTCG TCGTCGTCTC GCCGCAGCCA TGGTTTCCCG GGCAGTCGCT GATACGTCGC
GTGCGTGCGG GCTACCGTCC GCCGGTTGCC ACGTTCGAGG TCCAGCAGGG GATCGACGTC
CACCATCCGC GTTTCCTTTC GCTGCCCGGT GTGCTGCGCC GGCTCGACGG TCTGTCGATG
GCGCTCGCCT GCCTGCCGCT GCTGCGCCGC CTGCGCCGCG ACGGCGCACG ACTCATCGAC
GCGCACTTCG CCTATCCCGA CGGCGACGCG GCGACGCGCC TCGGGCGCTG GCTCGGCCTG
CCGGCGACCG TGACCTTGCG CGGCACCGAA GTGCCGCACA GCCGCAACCC GGTCCTGCGG
CGCCGGCTGC GCCGCGTCGT GCGTGACGCC GCGCGCGTGT TTTCGGTGTC GGATTCGCTG
CGGCGTCTCG CGCTGGAGCT CGGCGCCGAC CCGCGGAAGA CCGAGGTCGT CGGCAATGGC
GTCGACGTCG GCGTGTTCCA CCCGGTCGAT CGTGCCGCAG CCCGCGCGCG CTTCGGCCTG
CCCGACGATG CGCGCGTCCT CGTCTCGGTC GGGGGGCTCG TTGAGCGCAA GGGCATGCAC
CGGGTTCTCG ACTGTCTGCC GGCGCTGCGC GCGCAATGGC CGGACCTGCA TTACCTCGTG
GTCGGCGGCG CGAGTGCGGA AGGCGACATG CGTGCCGAAC TCGAGGCGCG GACCGCACGC
CTGGGCTTTG CCGGCCGCGT CCACTTTCCC GGCACCTTGC CGCCCGCCGA GCTCAAATGG
GCGCTCTCGG CCGCCGATGT GTTCGTGCTC GCGACGCGCA ACGAGGGCTG GGCCAACGTC
TTTCTCGAGG CGATGGCCTG CGGCCTGCCC GTCGTCACGA CCGACGTCGG CGGCAATCGC
GAGGTCGTCG GCAGCGCCGA ACTCGGTCGG GTCGTGCCCT TCGGCGACGC GTCCGCATTG
ACCGCGGCGC TAACCGACGC GCTGCGCACG GACTGGGACC GCGAGGCGAT CATCGACTAC
GCCCGGCGCA ACCAGTGGGA CGCGCGGATC GAGCAGCTGC TGCGCGCCTT CGACACGATC
GTCGGGATCC GCTCCGGCGA CGCGGAGTTC GCGCCGCGAT GA
 
Protein sequence
MTEARGGGAE IVVFSSLFPS AARPGAGLFI RERMFRVAQR RRLVVVSPQP WFPGQSLIRR 
VRAGYRPPVA TFEVQQGIDV HHPRFLSLPG VLRRLDGLSM ALACLPLLRR LRRDGARLID
AHFAYPDGDA ATRLGRWLGL PATVTLRGTE VPHSRNPVLR RRLRRVVRDA ARVFSVSDSL
RRLALELGAD PRKTEVVGNG VDVGVFHPVD RAAARARFGL PDDARVLVSV GGLVERKGMH
RVLDCLPALR AQWPDLHYLV VGGASAEGDM RAELEARTAR LGFAGRVHFP GTLPPAELKW
ALSAADVFVL ATRNEGWANV FLEAMACGLP VVTTDVGGNR EVVGSAELGR VVPFGDASAL
TAALTDALRT DWDREAIIDY ARRNQWDARI EQLLRAFDTI VGIRSGDAEF APR