Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0282 |
Symbol | |
ID | 3671424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 298888 |
End bp | 300423 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637708943 |
Product | polysaccharide chain length determinant protein |
Protein accession | YP_314040 |
Protein GI | 74316300 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAAG TTTTGCAGCA AGTTCTCGGC TACGCCAAGG CGGCGTGGCA ACGCCGCTGG TGGGGCATCG CGGTGGCCTG GCTCGTATGT ATCGTCGGCT GGACCTGGGT CATGATCATC CCGGACCGCT ACCAGGCGTC GGCGCGCGTC TACGTCGACA CGCAAACCCT CCTCAAGCCG CTGTTGTCGG GGCTTGCTGC CGAGCCCAAC GTCGAGCAGC AGATCAAGCT CATGACGCGC CAGCTGGTCA GCCGGCCGAC GCTGGAGAAG GTCGCGCGGA TGACCGATCT CGACGTGAGA GCCAACTCGC CCGAGCAGAC CGAGGCGATG CTCAACGGGC TCGCGAGCAA GATCTCGATC GCCGACGCTG GGCGCGAGAA CCTCTACACG ATCAGCTACC AGGACGCGAA CGGCGAACTC GCCAAGAAGG TCGTGCAGTC GCTGCTCACG ATCTTCGTCG AGTCGAGTCT CGGCAAGACG CGGCAGGACA TTTCGAGCTC GCAGCGCTTC ATCGAGGAGC AACTGCAGCA ATATCAGCAG AAGCTGACCG ACGCCGAGAA CGCGCTCAAG GAATTCAAGC AGAAGAACAT CGGCATGATG CCGGGGCAGG GTGGTGACTA CTACGCCAAG CTCGCCGAGG CGAGCGCCCA GTTGCGCCAG GCGCAACTCG ACCAGCAGGA GGCGGTCAAC CGCCGCAACC AGCTCAAGCG CCAGCTGGCC GATGAGGAGC CCGAGCTGAC CGCGGCCGCC GCGGCCGTGG CGACCGACAG CGAAATCGAC GGGCGGATCC AGGCCCTGCA GAAGCAGATG GACCAGTTGC GTCTGCAATA CACCGAGCTG CATCCCGACA TCCAGGCGAC CAAGCGCCTG ATCGAAAAGC TCGAGGCGCA GAAGAAGGCC GATCTCGCGC AGAAGAAGGC CGATCCGGCC GGTGCGCGTA TCCAGAACCC GGTTTATCAG CAGCTCACGA TCGCGATCGC CGAAGCCGAC GCGACGGTGG CGTCGCTGAG CGCGCGCGTG GCCGAGTACC AGCGGCGCTA CGGCGAATTG CGCAACGCCT CCAACATGAT TCCGCAGGTC GAGCAGGAAT ACACCCAGCT GATGCGCGAC TATGACGTCT ATCGCCAGAA CTACGACGCG CTGCTGAAGC GCCGCGAGTC GGTGACGATG TCGGGCGAAG TCGAGAGCAA GACCGATACC GTCGATTTCC GGGTCATCGA TCCGCCCTTC GTGCCGAGCC AGCCGGCCTG GCCGAATCGC CCGCTGCTGC TGTCGCTGGT CACGCTGGGC GGCCTCGGAG CGGGTATCGC GGTGTCCTTC CTCTTGAGCC AGCTGCGGCG CACGGTCACC GACCGTCGCG TGCTGCGCGA GCTGACCGGC CTGCCGCTGC TCGGCGCGGT CTCGCGCGTC GAGACCGAGC AGTCTCGGCG TCGCCGGCGC AAGGGCCTGC TGACCTATCT GGCCGCGCTC GGTAGCCTGA TTGCGGCTTA CGGTGCGGTG ATGGTCCTGC AGCTTGTCGT GACGCGCGCG GGTTAG
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Protein sequence | MDQVLQQVLG YAKAAWQRRW WGIAVAWLVC IVGWTWVMII PDRYQASARV YVDTQTLLKP LLSGLAAEPN VEQQIKLMTR QLVSRPTLEK VARMTDLDVR ANSPEQTEAM LNGLASKISI ADAGRENLYT ISYQDANGEL AKKVVQSLLT IFVESSLGKT RQDISSSQRF IEEQLQQYQQ KLTDAENALK EFKQKNIGMM PGQGGDYYAK LAEASAQLRQ AQLDQQEAVN RRNQLKRQLA DEEPELTAAA AAVATDSEID GRIQALQKQM DQLRLQYTEL HPDIQATKRL IEKLEAQKKA DLAQKKADPA GARIQNPVYQ QLTIAIAEAD ATVASLSARV AEYQRRYGEL RNASNMIPQV EQEYTQLMRD YDVYRQNYDA LLKRRESVTM SGEVESKTDT VDFRVIDPPF VPSQPAWPNR PLLLSLVTLG GLGAGIAVSF LLSQLRRTVT DRRVLRELTG LPLLGAVSRV ETEQSRRRRR KGLLTYLAAL GSLIAAYGAV MVLQLVVTRA G
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