| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0277 |
|---|
| Symbol | |
|---|
| ID | 3671419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 295776 |
|---|
| End bp | 296681 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637708938 |
|---|
| Product | ABC-2 type transporter ATPase |
|---|
| Protein accession | YP_314035 |
|---|
| Protein GI | 74316295 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.449682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.943388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGAAGG TCCACGGCCT GACCAAGCGC TACGGCGACG TCGAAGTCGT GCGCGGCCTC
GACCTGCACG TACGGCGCGG CGAATGTTTC GGCCTGCTCG GGCCGAACGG CGCGGGCAAA
ACGACGACCC TGCGGCTGCT CCTCGGCCTC ATCACACCCG ACGGCGGCAG CATCGAGCTT
GCCGGCTTCG CGGTGCCCGC ACATGCACGC GAGGCGCGGA TGAAAGTCGG CGTGGTGCCG
CAGATGGACA ATCTCGATCC GGACTTTTCG GTCCGCGAAA ACCTGCTCGC CTACGGGCGC
TACTTCGGCA TGAGCAAAGC CGCGATCGCG GCGCGCGTGC CCGAGCTGCT CGAACTCGCC
GGCCTCGCGA ACAAGGCCGA CGCCCGCATC GTGCAGCTCT CGGGCGGGAT GAAACGCCGG
CTCACGCTCG CCCGCGCGCT CGTGCACGAC CCGGACATCC TGTTTCTCGA CGAGCCGACG
ACCGGGCTCG ACCCGCAGGC GCGCCATCTG ATCTGGCAGG GCCTGCGGCG CCTGACCAAT
GCCGGCAAGA CCATCGTGCT GACGACGCAC TTCATGGACG AGGCCGAGCG CCTGACCGAC
CGCCTCGCGA TCCTCGACCA CGGCCGCGTC ATGACCGAGG GCGCGCCACG CGAACTCATC
GAATCGCACA TCGAGCCGGC GGTCGTCGAG ATTTTCGGCG AGGGCCTCGA AGACTGGACG
CGCGAACGCG CTGGCGCCGT GTGCCAACGC TTCGAAACCG TCGGCGAGAC GCTCTTCTGT
TATACGGACG AAGGCGAACG CGTGATCGCC GAACTCAAGC AGGCGCCCGC GCTGCGCTAC
CTGCACCGCC CCTCGAACCT CGAGGACGTG TTTCTCAAGC TCACGGGGAG GGATCTGCGT
GACTAG
|
|---|
| Protein sequence | MLKVHGLTKR YGDVEVVRGL DLHVRRGECF GLLGPNGAGK TTTLRLLLGL ITPDGGSIEL
AGFAVPAHAR EARMKVGVVP QMDNLDPDFS VRENLLAYGR YFGMSKAAIA ARVPELLELA
GLANKADARI VQLSGGMKRR LTLARALVHD PDILFLDEPT TGLDPQARHL IWQGLRRLTN
AGKTIVLTTH FMDEAERLTD RLAILDHGRV MTEGAPRELI ESHIEPAVVE IFGEGLEDWT
RERAGAVCQR FETVGETLFC YTDEGERVIA ELKQAPALRY LHRPSNLEDV FLKLTGRDLR
D
|
|---|
| |