Gene Tbd_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0262 
Symbol 
ID3671404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp283169 
End bp283669 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID637708923 
Producthypothetical protein 
Protein accessionYP_314020 
Protein GI74316280 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCG CCGCCGAGAC GAGCGGCCGC TGGCGCCGCA TCCTGGGCAG CCTGACGCTC 
GCCGTGCTGG TCGAGCAGCT GCCGTGGTCG GGCCTCGCCA TGGTATTGCG CCCCGACTTC
GTGCTGGTCG CGCTGCTGTT CTGGGTACTG CACCAGCCGC AGCGCGTGGG CTTCGGCATT
GCGTTCTTCC TTGGCCTGAT CGCGGATTTC CAGGACGGCG CAGCGCTCGG CCAGCATGGG
ATCGCCTACG TCGTCGGCGT TTATCTGGTG CTCTACCTGC GTCTGCGGCT GCTGCAGTTC
GACCCTTTCC GGCAGGCCGC GCAGCTGTTC CCGGTGCTTC TGGCGGTACA GCTGGTCGTG
CTGCTGGGTG GCTGGCTCGC GGTCAATCCG CCGGCCGGGC TGGCCATCCT GATGCCGGTA
TTCGGCAGCA CGTTCCTGTG GTATCTGTCT GCCCTCGTTC TGCGGCTGTG GCACGGCAAG
GGCGCGCAGG ATTCTCACTG A
 
Protein sequence
MNVAAETSGR WRRILGSLTL AVLVEQLPWS GLAMVLRPDF VLVALLFWVL HQPQRVGFGI 
AFFLGLIADF QDGAALGQHG IAYVVGVYLV LYLRLRLLQF DPFRQAAQLF PVLLAVQLVV
LLGGWLAVNP PAGLAILMPV FGSTFLWYLS ALVLRLWHGK GAQDSH