| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0257 |
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| Symbol | gatB |
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| ID | 3671399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 277945 |
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| End bp | 279372 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637708918 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_314015 |
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| Protein GI | 74316275 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGG AGACCGTCAT CGGGCTCGAA GTGCATACCC AGCTCGCCAC CCAGTCCAAG
ATCTTCTCGG CCAGCAGCAC GGCCTTCGGC GCCGCGCCCA ACACCCAGGC CAGCGCCGTC
GACATCGCAC TGCCCGGCGT GCTTCCCGTG CTCAACAAGG CGGCGGTCGA ATGCGCGATC
AAGTTCGGCC TCGCGATCGG CGCGACGCTC AACCGCGTCA ACGTGTTCGA CCGCAAGAAC
TACTTCTACC CCGATCTTCC CAAGGGCTAC CAGATCAGCC AGCTCGCCAA GCCCATCGTC
GAGGGCGGCG CGCTCACGAT CGTCGTCGAC GGCGTCGAGA AGACGATTCA TCTCACGCGC
GCGCACATGG AGGAGGACGC CGGCAAGTCG CTGCACGAGG ACTTCCACGG CATGACCGGC
ATCGATCTCA ACCGCGCCGG CACGCCGCTG CTGGAGATCG TCTCCGAACC CGAGATGCGT
TCGTCGGCCG AAGCCGTCGC CTACGCGCGC GCGCTGCACA CGCTCGTGAC CTGGATCGGC
ATCTGCGACG GCAACATGCA GGAAGGCAGC TTCCGCGTCG ACGCCAACGT CTCGGTGCGC
CCGCTCGGGC AGGCCGAATT CGGCACCCGG CGCGAGATCA AGAACCTCAA TTCGTTCCGC
TTCCTGCAGC AGGCGATCGA CTACGAAGTG CGCTGGCAGA TCGAGACGCT CGAAGACGGC
GGCCGCATCC AGCAGGCCAC GGTGCTGTTC GACCCCGACA CCGGCGAGAC GCGCATGATG
CGCAGCAAGG AAGAGGCGCA CGACTACCGC TACTTCCCCG ATCCCGATCT GCTGCCCGTG
AAGCTCGACG AGGCGTGGAT CGACGCCGTG CGGACGACCC TACCCGAGCT GCCGGCCGCG
ATGCGGACGC GCTTCCAGCA AGACTACGGC GTCTCGGCCT ACGACGCCTC GGTGCTGACC
GGCTCGCGCG CGCTTGCCGC CTACTTCGAG GCTGCGGCCC AGCAATCCGG GCAGCCCAAG
CTCGCCGCTA ACTGGGTCAT GGGCGAACTG TCCGCCGCGC TCAACAAGGC CGAGCTCGAC
ATCGGCGAGA GCCCGGTTTC GGCCGTGCAA CTCGGCACGC TCATCACCCG GATTCAGGAC
GGCACGCTCT CCGGCAAGCT CGCCAAGCAG GTGTTCGAAG GGCTGTGGGA AGGCGCCGGC
GACGTCGACG GAATCATCGC GGCACGCGGG CTCAAGCAGA TGTCCGACGC AGGTGAACTC
GAGAAGATCG TCGACGAGGT ACTCGCCGCC AATCAAAAGT CGGTCGAGGA ATTCCGTGCG
GGCAAGGACA AGGCGTTCAA CGCGTTGGTC GGCCAGGTCA TGAAGGCGAG CCGCGGCAAG
GCCAATCCCG CACAGGTCAA CGAACTGCTG AAAGCCAAGC TGCAGTAG
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| Protein sequence | MKWETVIGLE VHTQLATQSK IFSASSTAFG AAPNTQASAV DIALPGVLPV LNKAAVECAI
KFGLAIGATL NRVNVFDRKN YFYPDLPKGY QISQLAKPIV EGGALTIVVD GVEKTIHLTR
AHMEEDAGKS LHEDFHGMTG IDLNRAGTPL LEIVSEPEMR SSAEAVAYAR ALHTLVTWIG
ICDGNMQEGS FRVDANVSVR PLGQAEFGTR REIKNLNSFR FLQQAIDYEV RWQIETLEDG
GRIQQATVLF DPDTGETRMM RSKEEAHDYR YFPDPDLLPV KLDEAWIDAV RTTLPELPAA
MRTRFQQDYG VSAYDASVLT GSRALAAYFE AAAQQSGQPK LAANWVMGEL SAALNKAELD
IGESPVSAVQ LGTLITRIQD GTLSGKLAKQ VFEGLWEGAG DVDGIIAARG LKQMSDAGEL
EKIVDEVLAA NQKSVEEFRA GKDKAFNALV GQVMKASRGK ANPAQVNELL KAKLQ
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