Gene Tbd_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0216 
Symbol 
ID3671358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp236782 
End bp237474 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID637708877 
Producttwo component transcriptional regulator 
Protein accessionYP_313974 
Protein GI74316234 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR02154] phosphate regulon transcriptional regulatory protein PhoB 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.305183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCA ATATTCTGCT GGTCGAGGAC GAACCCGGGA TCCAGGAGCT GCTGAAATTC 
AATCTCACGC AGGCGGGTCA TCAGGTCACC GCGGCGGGGG ATGCCGAGCA CGCGCTGAAA
TTCCTCAAGA CGACGCTACC CGACGTCATC CTGCTCGACT GGATGTTGCC CGGCATGTCC
GGCATCGACC TGTGCCGGCG CCTGCGCGGC GACGCGCGCT ATCAGCCGGT TCCGATCATC
ATGCTGACCG CGCGCGGCGA GGAGCGCGAC AAGGTGCTCG GCCTCGACAC CGGCGCCGAC
GACTACATCA CCAAGCCGTT CTCGCCGCGC GAACTGGTCT CGCGGATCAA GGCCGTGTTG
CGCCGCCGCG CGCCGCAGAT GACCGAGGAA GCGGTCGAAG TCGCCGGCCT GCGGCTCGAC
CCGGTAAGCC ATCGCGTCCA GGGCAAGGGC ATCGCGCTCG AGCTCGGTCC GACCGAGTTC
CGCCTGCTGC ATTTCTTCAT GACCCATCCC GAGCGCGTCT ACACGCGGCC GCAGCTGCTC
GATCAGGTCT GGGGCGACGA CGTGTTCGTC GAAGAGCGCA CGGTCGACGT CCACATCCGT
CGCCTGCGGC TCGCGCTCGA GCCCTCCGGG CACGCCGCGC TCGTGCAGAC GGTACGCGGC
TCCGGCTATC GCTTTTCGAC CGAAGTGGGC TGA
 
Protein sequence
MAANILLVED EPGIQELLKF NLTQAGHQVT AAGDAEHALK FLKTTLPDVI LLDWMLPGMS 
GIDLCRRLRG DARYQPVPII MLTARGEERD KVLGLDTGAD DYITKPFSPR ELVSRIKAVL
RRRAPQMTEE AVEVAGLRLD PVSHRVQGKG IALELGPTEF RLLHFFMTHP ERVYTRPQLL
DQVWGDDVFV EERTVDVHIR RLRLALEPSG HAALVQTVRG SGYRFSTEVG