| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0213 |
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| Symbol | ubiB |
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| ID | 3673659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 233773 |
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| End bp | 235341 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637708874 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_313971 |
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| Protein GI | 74316231 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.331416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCC TGCGTCTCGC GCGCATCATC CGCACCGGCC TGCGCTTCGG TCTCGAAGAG
TTCTTCCTCG GACACGAGCG CGTACGCCCC TTGCGCTGGC TCGTGCGCAT CACGCTGTTC
TGGCGACCGC TGCGCGAGCC GCGCGCCGTG CGCCTGCGCC GCGCGCTCGA GTCGCTCGGA
CCGATATTCG TCAAGTTCGG GCAACTCCTG TCGACCCGCC CCGACCTCGT GCCTGCGGAC
ATCGTCGAAG AGCTGTCGCG CCTGCAGGAC CGCGTCCCGC CCTTTCCCTC GGTGCAGGCG
ATCGCGACGA TCGAGGCCGC CTACCGCACG CCGCTGTCTT CGGCTTTCGC CGAGTTCGAC
GCCACCCCGG TCGCCTCGGC TTCGGTCGCC CAGGTGCATT TCGCGCGGCT GCACGACGGT
ACCGAGGTGG CGGTCAAGGT CCTGCGCCCC GGCATCGCGC CGGTCATCGC GCACGACGTC
TCGCTCATGT ACCTCGCGGC GGCGCTCGTC GAGAAGCTGT TCGCCGACGG CAAGCGGCTG
CGTCCGCGCG AGGTCGTCTC CGAGTTCGAA AAACATCTGG CCGACGAGCT CGACCTCATG
CGCGAGGCGT CCAACTGCTC GCAGCTGCGG CGCAACTTCC GCGACTCGCC GCTGCTCGCG
GTGCCCGAGG TGTACTGGGA CTACTGCAGT GCGGACGTCA TGGTGATGGA CCGCATGGAC
GGCATTCCGG TCAGTCAGAT CGAGCGCCTG CGCGAAGCCG GCGTCGACTT CGGGCGACTG
GCCGCGACCG GTGTCGAAAT TTTCTTCACC CAGGTGTTCC GCGACGGCTT TTTCCACGCC
GACATGCATC CGGGCAACAT CCTCGTACGG CCGGCTCGCG ACCTCGCCGG CAGCCCGGCG
GCCGGCGAGG TCGCGCGCGT CGACCAGTAT GTCGCGCTCG ATTTCGGCAT CATGGGAACG
CTCACCGAGA TCGACAAGCA GTACCTCGCG CGCAATTTCC TCGCCTTCTT CCGCAGGGAT
TACCGCGGCG TCGCGCTCGC GCATCTCGAA TCGGGATGGG TTCCGCCCGA CACGCGCGTC
GACGAACTCG AAGCGGCCGT GCGCGCCGTG TGCGAACCGG TATTCGATCG GCCGCTCAAG
GACATCTCGT TCGGCCGCGT GCTGCTGCAG CTCTTTCAGG CCTCGCGCCG CTTCAACGTG
GAAATCCAGC CGCAGCTCGC GCTGCTGCAG AAGACGCTGC TCAACATCGA AGGACTGGGG
CGTCAGCTCG ACCCGGATCT CGATCTGTGG AAGACCGCAA AGCCATTCCT CGAGCGCTGG
ATGAACGAGC AGATCGGCTG GCGGGCGCTG CTCAAGAGCC TCGAAGCCGA GGCGCCGAAA
TGGGCGACCC TGCTGCCGCA GCTGCCGCGG CTGGCTCACG CCGCGCTCGC CGACAACCGT
CTCGCGCTGG TGGAAGCGGA TCTCGTGCTG ATGCTGCGCC AGCAGCAGAC GCGCAACACA
TGGCTCGGGG CGATCGCCGT GCTGCTCACC GTGCTGTCGG GGCTCGTGCT CTATTCCATC
CTGCAGTAG
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| Protein sequence | MKLLRLARII RTGLRFGLEE FFLGHERVRP LRWLVRITLF WRPLREPRAV RLRRALESLG
PIFVKFGQLL STRPDLVPAD IVEELSRLQD RVPPFPSVQA IATIEAAYRT PLSSAFAEFD
ATPVASASVA QVHFARLHDG TEVAVKVLRP GIAPVIAHDV SLMYLAAALV EKLFADGKRL
RPREVVSEFE KHLADELDLM REASNCSQLR RNFRDSPLLA VPEVYWDYCS ADVMVMDRMD
GIPVSQIERL REAGVDFGRL AATGVEIFFT QVFRDGFFHA DMHPGNILVR PARDLAGSPA
AGEVARVDQY VALDFGIMGT LTEIDKQYLA RNFLAFFRRD YRGVALAHLE SGWVPPDTRV
DELEAAVRAV CEPVFDRPLK DISFGRVLLQ LFQASRRFNV EIQPQLALLQ KTLLNIEGLG
RQLDPDLDLW KTAKPFLERW MNEQIGWRAL LKSLEAEAPK WATLLPQLPR LAHAALADNR
LALVEADLVL MLRQQQTRNT WLGAIAVLLT VLSGLVLYSI LQ
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