| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0202 |
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| Symbol | |
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| ID | 3673648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 220481 |
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| End bp | 221569 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637708863 |
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| Product | Type IV pilus assembly protein PilM |
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| Protein accession | YP_313960 |
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| Protein GI | 74316220 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.466889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACATTA ATATCAATAT GGACTGGCTG TCGGCCAAGG GCCTGCCCAT TCTGGGCCTG
GACATCAGTA CGACGGCCAT CAAGCTAGTC GAGCTGTCCG ATGCGGGCAA GGGCATGTTG
AGGGTCGAGC GCTACATCAT CGAGCCGCTG CCGAAGGACG CGGTGAGCGA CGGCAACATC
GCCAATCTCG ATCAGGTCGC CGACACGCTT CGCCATGCCT GGAAAACGCT CGGCTCGCGC
GTCAAGAACG TCGCGCTCGC CTTGCCGTCA TCGGCCGTCA TTACCAAGAA AATCCTTGCT
CCGGCGAGCC TCACCGGGAT CGAGCTGGAA AATCAGGTCG AGGCCGAGGC GAATCAGGTC
ATTCCCTTCG CGCTCGACGA GGTGAACCTC GATTTCCAGG TGCTCGGGCC GTCGCCCGGG
AGTCCGGACG ACATGCAGAT CCTGCTCGCG GCCGCGCGCA AGGAAAAGGT CGAGGACCGG
GTCGCCGCGG TCGAGGCGGC CGGCCTGAAG GCGCTGATCA TGGACGTCGA GTCGTACGCC
ACGCAGGCCG CCTATGAGCA GATCGCCCAC CTGCTGCCCA ATGGCGGCGC GGGGCAGACC
GTCGCGATCA TCGACGTCGG GGCGCAGAAC ATGCACATCA ACATCCTGAA CGACAACGAA
TCGGTGTACC TGCGCGAGCA CGGCTTCGGC GGCAACCAGC TCAACAACGA AATCGCGCGG
CGCTACGGCA TGTCGGGCGA GGAGGCCGAA AACGCGAAGC GCAAGGGCTC GCTGCCGGAA
AGCTACGAAC TCGAGGTGTT GCAGCCTTAC AGCGAGACGC TGGCGATGGA AATCGGCCGC
GCGCTGCAGC TCTTCACGAC CTCGACGCAG TACCGCAAGA TCGACCAGAT TCTGCTCGCC
GGAGGCGGCG CCATGATCCC GGGTCTCGAC GAAGTCGTCG CCCAGCGCAC GGGTACGCCG
ACCCTAGTCG TCAACCCGTT CGCCAACATG GCGGTCGCTT CGAAAGTCCG CCCCCAAGCC
CTTACCGCCG ACGCGCCTTC GCTGTTCGTC GCCTGCGGCC TCGCCATGCG GAGGTTCGAC
TCGCAATGA
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| Protein sequence | MHININMDWL SAKGLPILGL DISTTAIKLV ELSDAGKGML RVERYIIEPL PKDAVSDGNI
ANLDQVADTL RHAWKTLGSR VKNVALALPS SAVITKKILA PASLTGIELE NQVEAEANQV
IPFALDEVNL DFQVLGPSPG SPDDMQILLA AARKEKVEDR VAAVEAAGLK ALIMDVESYA
TQAAYEQIAH LLPNGGAGQT VAIIDVGAQN MHINILNDNE SVYLREHGFG GNQLNNEIAR
RYGMSGEEAE NAKRKGSLPE SYELEVLQPY SETLAMEIGR ALQLFTTSTQ YRKIDQILLA
GGGAMIPGLD EVVAQRTGTP TLVVNPFANM AVASKVRPQA LTADAPSLFV ACGLAMRRFD
SQ
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