| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0201 |
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| Symbol | |
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| ID | 3673647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 217797 |
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| End bp | 220178 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637708862 |
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| Product | peptidoglycan glycosyltransferase |
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| Protein accession | YP_313959 |
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| Protein GI | 74316219 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.558494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCA GATGGTGGCA TTACGCATTG GCGCTGGTCG TGAGCCTCGG CGTCGTCGGC
ACTGCGCTCG CCGGCCTCGC GGCCGCCCTG ATCTACCCCA ACCTGCCGCC GCTCGAGGCG
TTGACCGACT ACAAGCCCAA GCTGCCACTG CGCGTCTACA CCGCGGACGG CGCGCTGATC
AGCGAATTCG GCGAGGAGCG GCGCGCGTTC ATCGCGATCG ACAAGGTTCC GCGCTACATG
AAACAGGCGA TCATCGCGGC CGAAGACGAG CGCTTCTACA GCCACGGTGG TGTCGACACC
CTTGGCGTGC TGCGCGCTGC GGGCGCGAAT TTGGTGTCGG GCGGGGCAAA GGAAGGCGCG
TCGACGATCA CGATGCAGGT CGCGCGCAAC TTCTTCCTGT CGAACGAGAA GACCCTGAGC
CGGAAACTGT CCGAGGCGAT GCTCGCGATG AAGATCGAGC ACAGCCTTTC AAAGGACAAG
ATACTCGAGC TCTACATCAA CCAGATCTAC CTCGGGCAGC GTGCCTACGG CTTCGAAGCC
GCAGCCCGCG CCTATTTCGG CAAGCCGATG AAGGAACTCA CGCTCGCCGA GTTCGCCATG
CTCGCCGGCC TGCCGAAGGC GCCATCACGC TACAACCCGG TCGTCAATTT TCCGCGCGCG
AAGGCACGAC AGGAGTATGT GCTCGGGCGC ATGCTCAAGC TCGGGTTCAT CGACCGGCCG
ACCTGGCAGG CGGCGGTCGG ACAAAAGCTC GTCATCCGTG AGGCACGCCA GCACGCGGAC
GTTGTGGCAG ACTACGCCGC CGAAATGGTG CGCCAGATCC TGTTCGAAAA ATACGGGGAA
GCGATCTACA GCTCCGGCTA CAAGGTGGTG ACCACGTTGC GCCGCAGCCA GCAGAACAGC
GGGAACCTCG CCGTCTGGCG CGGCATCGCC GACTATGACC AGCGCCACGG CTACCGCGGG
CCCGAAAAGC AGATTCGCCT GCCTGCCGAC AGGGCGGAAC GCGACAGCGC GATCGCCACG
GCCCTCGCCG ACCTCGCGCC GGTCGGCGGC ATGCTGCCGG CCGTCGTCAC GCGTGCCGAC
AAGAAATCCA TTCACGCGCA GCTGGCGGAC GGCACGGTTG CCGAGATCTC CGGCAAGTCG
CTCAAGTGGG TGGACAACTG GGCCACCGCC AAGAAAGGGC GAAAGCTCGA GCCCGGCGCG
ATCGTCCGCG TCCAGACCGG CGCCGGCAAG GAGCGCTGGC GCCTCGCCCA GCTGCCCGAG
GTCGAGGCGG CCCTGGTCGC GCTCGACCCC AACAGCGGCG CGATCACCGC ACTGGTGGGC
GGCTTCGACT TCAACCGAAA CAAGTTCAAC CGCGTGACGC AGGCGTGGCG GCAACCTGGG
TCGAGCTTCA AGCCCTTCAT CTATTCGGCG GCCCTGGAAA AGGGCTACAC CCCGGCGACC
ATCCTCGACG ACGCACCATT GATACTCGCC GCCGAAGAGG CGGGCGGCAC GGCGTGGGAG
CCACGCAACT ACGACGGCAG CAGCAGCGGG CCCGTGCGCA TGCGCACCGC GCTCACCAAA
TCGCTCAATC TGGTGTCGAT CCGCATTCTG CAAGGCATCG GCCCGCACTA TGCACGCGAC
TACATCCGCC GCTTCGGCTT CGACCCGGCG CGTCACCCGC CCTATCTGAC GATGGCGCTC
GGCGCCGGCA GCGTCACGCC GCTGCAACTC GCCTCGGCCT ACGGCGTCTT CGCCAACGGC
GGTTTCGGGG TCAAGCCCTA CCTCATCGAC AAGGTCTTCG ACAAGGACGG CCGCCTGCTG
ATGCAGGCCA GCGCGCAAAA GGCCGGCGTC AACGCGCCCC GCGTCATCGA CCCGCGCAAC
GCCTGGCTGA TGACGAACAT GATGCAGGAC GTCGTGCGTT ACGGCACCGC GGCGCGCGCC
TCGCAGCTCA AGCGCAGCGA CATCGCCGGC AAGACGGGCA CGACCAACGA TGCGCGCGAC
ACCTGGTTCG CCGGCTACAC CCCGGACCTC GTCGCGGTCG CTTGGATGGG TTACGACCAG
CCCCGCTCGA TGGGCCGGCG GGAGACCGGC GCGCAGTCGG CCTTGCCGGT CTGGATGAGC
TTCATGGGGA CGGCGCTCAA GGGCATTCCG CAAAAAGGCT GGGCGATGCC CGCCGGCCTC
GTCAGCGTGG AAATCGATCC GGTGACGGGC GCGCGCGCGT CCGGATCGGC GATCGACGAA
TTTTTCGGCG ATCTGTTCGG CACCGAAGCG GAGTCCATCG TCGAACATTT CTATCAGGAG
TTTCCGCCGC CCGACCGCGC CGCGCCGCCG ACCGACCTGC TCGAAGCGCC CACGGAGACG
CCCTCCGACC CGGACGCACC ACCTCCCGGG ATACCGCAGT GA
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| Protein sequence | MFSRWWHYAL ALVVSLGVVG TALAGLAAAL IYPNLPPLEA LTDYKPKLPL RVYTADGALI
SEFGEERRAF IAIDKVPRYM KQAIIAAEDE RFYSHGGVDT LGVLRAAGAN LVSGGAKEGA
STITMQVARN FFLSNEKTLS RKLSEAMLAM KIEHSLSKDK ILELYINQIY LGQRAYGFEA
AARAYFGKPM KELTLAEFAM LAGLPKAPSR YNPVVNFPRA KARQEYVLGR MLKLGFIDRP
TWQAAVGQKL VIREARQHAD VVADYAAEMV RQILFEKYGE AIYSSGYKVV TTLRRSQQNS
GNLAVWRGIA DYDQRHGYRG PEKQIRLPAD RAERDSAIAT ALADLAPVGG MLPAVVTRAD
KKSIHAQLAD GTVAEISGKS LKWVDNWATA KKGRKLEPGA IVRVQTGAGK ERWRLAQLPE
VEAALVALDP NSGAITALVG GFDFNRNKFN RVTQAWRQPG SSFKPFIYSA ALEKGYTPAT
ILDDAPLILA AEEAGGTAWE PRNYDGSSSG PVRMRTALTK SLNLVSIRIL QGIGPHYARD
YIRRFGFDPA RHPPYLTMAL GAGSVTPLQL ASAYGVFANG GFGVKPYLID KVFDKDGRLL
MQASAQKAGV NAPRVIDPRN AWLMTNMMQD VVRYGTAARA SQLKRSDIAG KTGTTNDARD
TWFAGYTPDL VAVAWMGYDQ PRSMGRRETG AQSALPVWMS FMGTALKGIP QKGWAMPAGL
VSVEIDPVTG ARASGSAIDE FFGDLFGTEA ESIVEHFYQE FPPPDRAAPP TDLLEAPTET
PSDPDAPPPG IPQ
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