Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0155 |
Symbol | |
ID | 3673601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 167369 |
End bp | 168097 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637708816 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_313913 |
Protein GI | 74316173 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.388772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.374711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCCC CGCGCTTCTT CCTCGACCAG ACGCTGAGCC TCGGCGCCCG CTTCGGCCTG CCCGCCGGCC CGGCGCGTCA CGCCGCCCGC GCGCTGCGGC TCGCGGCAGG CGACGCGCTC ACGCTGTTCA ACGGTCGCGG CGGCGAATAC ACGGCCAGTG TCGAGCGCAT CACCCGGGAC GAGGTTGCGG TCGCGATCAC GGGCTTTCGC GAGATCGAAC GCGAATCGCG TTTGGCAATC ACGCTGGCGC AGGGGATATC GAGCGGCGAG CGCATGGACT ACACGCTGCA AAAGGCGACG GAACTCGGCG TGACGGCGAT CCAGCCGATC GCCGCCAAGC GCAGCGTCGT CAAGCTCGCC GGTGAGCGCG CCGAGAAACG CGTCGCGCAC TGGCAGGGCG TCGTCGCGAG CGCCTGCGAG CAGTGCGGGC GCAACCGGCT GCCGTCGATC GCGGCGCCGT TGCCGCTCGC CCAGTGGCTC GGCACGGGCA CCGACGAGCG TCTGCTGTTC CTCTCGCCGC TTGCGCAGGC CCGACTCGCC GATCTCGCCG CGCCGAGCGG ACGCGACGTC CTGATCGCGG GCCCGGAAGG CGGTTTCGAA GCCGACGAAA TCGCGGCGCT ACATGCGGCC GGCGCCGTGC CGATCCGCCT CGGCCCGCGC GTGCTGCGCA CCGAAACCGC TGCACTCGCG GCGCTGGCTG CGATGCAGAC GCTCTGGGGC GATTTCTGA
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Protein sequence | MSSPRFFLDQ TLSLGARFGL PAGPARHAAR ALRLAAGDAL TLFNGRGGEY TASVERITRD EVAVAITGFR EIERESRLAI TLAQGISSGE RMDYTLQKAT ELGVTAIQPI AAKRSVVKLA GERAEKRVAH WQGVVASACE QCGRNRLPSI AAPLPLAQWL GTGTDERLLF LSPLAQARLA DLAAPSGRDV LIAGPEGGFE ADEIAALHAA GAVPIRLGPR VLRTETAALA ALAAMQTLWG DF
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