Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0145 |
Symbol | |
ID | 3673289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 155875 |
End bp | 156624 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637708805 |
Product | Sel1 repeat-containing protein |
Protein accession | YP_313903 |
Protein GI | 74316163 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.853386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCCG CCTGTCCGCT GTGCGGGAGC AAGAAAATCC GCCGCGGTTC GCTCCACGCC CATGACGGCG TGCGGCACCT GCTGCTCGAC ACGCCATTGC GCTGCCGCGA CTGCCGGCAC CGCTTCTGGG CATTCAGCCC GCTCAAACCG CTGTTGCTGC TCGTGCTCGT CGGCGCGCTC GTCGGAGTCA CGGCCTGGCT CGCGCGTGAA CAACGAACGG CAGCGCCCGC CCAGGATGCC GCGACCGTAT TGCCGCACAC GCGCGCCGAG CAGGGCGACG CCGAGGCGCA GTTGCAGCTC GCCCTGCGCT ACGCCGACGG CGACGGCGTG ATCCAGAATG ACAAGGAAGC GGCGCGCTGG TTTGCGCTCG CGGCCAAACA AGGCCTCCCC GAAGCGCAGT ACCGATACGG GCGCGCCTTG CTCGAAGGCC GCGGCGTCGT TCAGGACTAC AAAGCTGCGT TCAGCTGGAT CGAAAAACCC GCGCAGCACG GTTACGCGAA GGCGCAATAC AGCCTGGGCG AACTCTATCG CTACGGCACT GGCACCGCGA TCGACAAGGC GCGCGCCTAT CTCTGGTTCA ACCTCGCCGC CGCGCAGGGC ATGGAGGCCG CCGCGAAAGC CCGCGACAGC CTGGTGTGGC AGCTCAAGCC CGAGCAGATC GCCGCGATGC AGGACGAGGC CCGACGCATG AGCCAGGACG CGTCCGCAGC GCCGGCGCCT GCCACTGCGG AACAGCAGGC GCTTCAATAA
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Protein sequence | MAAACPLCGS KKIRRGSLHA HDGVRHLLLD TPLRCRDCRH RFWAFSPLKP LLLLVLVGAL VGVTAWLARE QRTAAPAQDA ATVLPHTRAE QGDAEAQLQL ALRYADGDGV IQNDKEAARW FALAAKQGLP EAQYRYGRAL LEGRGVVQDY KAAFSWIEKP AQHGYAKAQY SLGELYRYGT GTAIDKARAY LWFNLAAAQG MEAAAKARDS LVWQLKPEQI AAMQDEARRM SQDASAAPAP ATAEQQALQ
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