| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0135 |
|---|
| Symbol | |
|---|
| ID | 3673914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 144248 |
|---|
| End bp | 145615 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637708795 |
|---|
| Product | periplasmic sensor Signal transduction histidine kinase |
|---|
| Protein accession | YP_313893 |
|---|
| Protein GI | 74316153 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0665221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGG CGCGCGCCTA TTCGCTGCGG CGGCGGCTGG TCGGGCTGCT GACGGCTGCG
ATCGCGCTGG TCTGGCTGCT GTCGGCGCTA TTCGTCTACG CGCGCGCCCA CCACGAAGCC
GACGAACTGC TCGACAGCCA GCTGACGGAG GTGGCGGAGA CGCTGCTCGC GATCGTCGCG
GCCGGCGAAG TCGACCATTT CGTCGAGGAA TTGCACGAAC ACGCAGAAGG CTATCCGGTC
CCGATCGCGT TCGAAATCTG GCATACCGAC GACGGCGTCT CCCGTCGCCT GGTCGCTTCA
CCGGGCTACG CGGGCTTCGA CACCCCCGCG CCGAGCGGCT TCAGCGAACG GACCCATCAG
GACGCCCCGT GGCGGTTCTA CACGGCGCAG GACGAAGAGG CGGCGTACCG CGTCGTCGTC
GGCCAGGCCC ACGGTGTGCG CGAACGGCTC GCGCGCGAGA TCGGGCTGTC GCTGCTGCTG
CCTGCCGCGC TCGCGCTGCC GCTCATGGCG CTCGTCGTCT GGTGGGTCGT CGGCCGTACC
TTGCGGCCGG TCGACGCGGT CGCGCGCGAG GTCGGGGCGC TCGACCCTCG GACACTGAGC
CCACTCGACC CATCGGTCGC GCTGCCGGAC GAGATCGCGC CGCTGCGCGC AGCGCTCAAT
GCCTTGATCG AGCGCGTCAC CCGCGCCTTC GAAAACGAGC GTCGGTTCAC CGCCGATGCG
GCGCACGAAC TGCGCACGCC GCTGGCGGCG CTCAAGGTCC AGGCGCAGGT CGCGCAGCGC
GCGCAGGCGG ACGAAGCGCG CCGGCACGCG CTGGGGCAGG TCGTCGCCGG CGTCGACCGC
ATGACCCATC TGGTCGAGCA GTTGCTGACC TTGGCCCGCG TCGACCCCGC CCGCCAGCGG
ACGCCGCCCG AGCCGCTCGA TCCCGCGGCG ACCGTGACGC AGGTGTGCGC CGAACTGCAG
CCGCGCGCCG CGCAGCGCAA GCAGTCGCTG CAGGTCGACG CGCCGTCCGG CTGCCAGGTC
GCAGTCGACC CGGTCTGGCT CGCGATCGCC TTGCGCAATC TCGTCGACAA TGCCATCGCC
TATGCCGGGG CCGGCGCGCA CATCGAGGTC AGGCTGGCAG GCCACGGCGC GGCCTGTACG
CTGAGCGTGG CCGACGACGG GCCCGGCGTC GATCCCGGAC TGCGCAGCCG CCTGAGCGCG
CGTTTCGTGC GCGGCGAGAG CGGCGGAGAC GGCTGCGGCC TGGGCCTGTC GATCGCCGCG
CGCGTCGCCG AGTTGTCGAA CGCGCGGCTC GAACTCGGCG AAGGCCTCAG GCGCGCCGAT
GAAGGGTATG GCTTCGCGGC GACGCTCCGC TTCGCCGCCC CCGGATAG
|
|---|
| Protein sequence | MSEARAYSLR RRLVGLLTAA IALVWLLSAL FVYARAHHEA DELLDSQLTE VAETLLAIVA
AGEVDHFVEE LHEHAEGYPV PIAFEIWHTD DGVSRRLVAS PGYAGFDTPA PSGFSERTHQ
DAPWRFYTAQ DEEAAYRVVV GQAHGVRERL AREIGLSLLL PAALALPLMA LVVWWVVGRT
LRPVDAVARE VGALDPRTLS PLDPSVALPD EIAPLRAALN ALIERVTRAF ENERRFTADA
AHELRTPLAA LKVQAQVAQR AQADEARRHA LGQVVAGVDR MTHLVEQLLT LARVDPARQR
TPPEPLDPAA TVTQVCAELQ PRAAQRKQSL QVDAPSGCQV AVDPVWLAIA LRNLVDNAIA
YAGAGAHIEV RLAGHGAACT LSVADDGPGV DPGLRSRLSA RFVRGESGGD GCGLGLSIAA
RVAELSNARL ELGEGLRRAD EGYGFAATLR FAAPG
|
|---|
| |