Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0120 |
Symbol | murC |
ID | 3673899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 128556 |
End bp | 129947 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637708780 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_313878 |
Protein GI | 74316138 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0146201 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACATG CCGTCAAGCA CATCCATTTC ATCGGCATCG GCGGTGTCGG CATGAGCGGG ATCGCCGAAG TGCTGCTGAA TCTGGGTTAT GCGGTGTCCG GCTCCGACCT CGCCGACAAC GCGGTGACGC AGCGCCTCGC GAAACTCGGT GCCCGCATCC ACCGCGGTCA TGCGCCGTCG AATATCGCTG GCGCCGATGC GGTCGTGACC TCGACCGCGG TGCAGGAATC GAACCCCGAA GTCGTCGCGG CGCGCGAGAA GAAGATCCCG ATCGTGCCGC GCGCGCTGAT GCTCGCCGAA CTGATGCGCC TGCGCCAGGG CATCGCGATC GCCGGGACCC ACGGCAAGAC CACGACGACG AGCCTCGTCG CGAGCATCCT CGGCGAGGCG GGCATGGACC CGACCTACGT CATCGGCGGC AAGCTCACGG CCGCCGGCAC CAACGCGCGC CTCGGGCAGG GCGACTTCCT GGTCGCCGAG GCCGACGAGT CCGACGCGTC CTTCCTCTAT CTCACGCCCG TGATCGCGAT CGTCACCAAC ATCGACGCCG ATCACATGGA CACCTACGGC CATGATTTCG ATCGCCTCAA AACGGCCTTC GTCGACTTCT GCCAGCGCCT GCCCTTCTAT GGCATGGCGG TGCTGTGCAT CGACGACGCC AACGTGCGCG AAATCCTGCC GCGCATCACC AAGCCGATCA CGACCTACGG CTTCGACCCG GCGGCGCAGG TGCGCGCGGT CGACACGCGC TTCGAGCACG GCCAGATGCG CTTCACCGTC AAGCGCGAGG GCATGGCCGA CCTCGACGTG ACGCTCAACC AGCCGGGGCT GCACAACGTG CTGAACGCGC TCGCCGCGAT CGCGGTCGCG ACCGAAGTCG GCGCGAGCGA CGCCGCGATC GTCAAGGCGC TCGCCGAATT CCACGGCGTC GGCCGGCGCT TCCAGCGCTA CGGCGAACAC CCGACGAAAG ACGGCGGCTG CTACTGGCTG ATCGACGACT ACGGACACCA TCCGGTCGAA ATGGCCGCGA CGCTCGCTGC GGCGCGCGGA GCGTTTCCGG GACGACGTCT CGTGCTCGTG TTCCAGCCCC ACCGGTACTC ACGCACCCGC GACTGCTTCG AGGATTTCGT CAAGGTCCTG TCGGAGACCG ACGCGCTGGT GCTGACCGAG GTCTATCCGG CCGGCGAGGC GCCGATCGTC GCCGCCGACG GCCGCGCCCT CGCGCGCGCG GTGCGGGTCG CCGGCAAGGT CGAGCCGGTG TTCGTCGAGA ACGTCGCCGA TGTCGCCGCA ACCGTGCGCG ACCTCGTGCA GGCGGACGAT GTCGTGCTGG TGATGGGCGC GGGCAGCATC GGCCAGGTCG CGCCCGCGCT TGGAGAACGC GATGCGCCAT GA
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Protein sequence | MKHAVKHIHF IGIGGVGMSG IAEVLLNLGY AVSGSDLADN AVTQRLAKLG ARIHRGHAPS NIAGADAVVT STAVQESNPE VVAAREKKIP IVPRALMLAE LMRLRQGIAI AGTHGKTTTT SLVASILGEA GMDPTYVIGG KLTAAGTNAR LGQGDFLVAE ADESDASFLY LTPVIAIVTN IDADHMDTYG HDFDRLKTAF VDFCQRLPFY GMAVLCIDDA NVREILPRIT KPITTYGFDP AAQVRAVDTR FEHGQMRFTV KREGMADLDV TLNQPGLHNV LNALAAIAVA TEVGASDAAI VKALAEFHGV GRRFQRYGEH PTKDGGCYWL IDDYGHHPVE MAATLAAARG AFPGRRLVLV FQPHRYSRTR DCFEDFVKVL SETDALVLTE VYPAGEAPIV AADGRALARA VRVAGKVEPV FVENVADVAA TVRDLVQADD VVLVMGAGSI GQVAPALGER DAP
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