| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0098 |
|---|
| Symbol | |
|---|
| ID | 3673876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 104260 |
|---|
| End bp | 105540 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637708758 |
|---|
| Product | UDP-glucose/GDP-mannose dehydrogenase |
|---|
| Protein accession | YP_313856 |
|---|
| Protein GI | 74316116 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.15381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.264106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTG TTGCGGTTGT CGGGCTGGGC TACGTCGGCC TGCCCTTGGC GGTGGAATTC
GGCAAGAAGA CGCGCACTGT CGGTTTTGAC CTTTCACGCG AAAAAATCGA GCACTACCGT
CGATTCTGCG ACCCCACCGG CGAAGTGTCG TCGGACGACC TCAAGGCGGC GACGCATCTC
ACCGTGACGA CCGACCCGGC CGCGCTGGCC GAGGCCGATT TCATCGTCGT CGCGGTACCG
ACCCCGGTCG ACGCGGCGCA TATCCCGGAT TTCTCCCCGC TCGTCGGCGC GTCGACCACG
GTCGGCAAAC ACATGAAAAA AGGCGCGACG GTGATCTACG AATCGACAGT CTACCCCGGC
GCCACCGAGG AGGTCTGCAT CCCGATTCTC GAGAAGAATT CGGGCATGAC GTGGCGCCAC
GGCTTCCACG TCGGCTACTC GCCCGAGCGC GTGAACCCCG GCGACAAGGA AAGGACGATC
ACCCGGATCG TCAAGGTCGT CTCGGGCGAC GACGCGGCGA CCCTCGACAA GGTCGCCGAG
CTCTACGGCA GCGTGATCAC GGCCGGCGTG CACCGCGCGA GTTCGATCAA GGTCGCCGAA
GCGGCCAAGG TCATCGAGAA CACGCAGCGC GACCTCAATA TCGCGCTCAT GAACGAACTC
TCGCTGATCT TCCACCGCCT GGGCATCGAC ACGCTCGAGG TGTTGAAGGC CGCCGGAACC
AAGTGGAACT TCCTGCCCTT CCGCCCGGGC CTCGTCGGCG GCCACTGCAT CGGCGTCGAC
CCCTACTACC TGACGCACAA GGCCGACATG CTCGGCTACC ACCCGCAGGT CATCCTCGCC
GGCCGCCGCA TCAACGACGG CATGGGCGCC TACGTCGCCC AGGAAACGGT GAAGAAAATG
ATCGCCGGCG GTGTCCAGGT CAAGGGCGCC AAGGTCAACG TGCTCGGGCT CACGTTCAAG
GAAAACTGTC CCGACCTGCG CAATTCCAAG GTCGTCGACG TCATCCGCGA GCTGCAATCC
TTCGGCTGCG AGGTGCACGT CCACGATCCG CTCGGCGAGT CGAAGGAGGC CGAACACGAA
TACGGGATCG GCCTCACCGC GTGGGAGGAG CTGCCGGCGT GCGACGCGCT CGTCGCCGCG
GTCTCGCATG CCGCCTACCT CGACAAGCCG TTCGCGGAAC TGACCGCGAC CCTGAAGAAG
GGCGGCACCT TCACCGACGT CAAGTCGGCG TATGACCCGG CGACCGTGGA AGCCGCGGGC
TTCGCCCTAT GGAGGCTCTG A
|
|---|
| Protein sequence | MSVVAVVGLG YVGLPLAVEF GKKTRTVGFD LSREKIEHYR RFCDPTGEVS SDDLKAATHL
TVTTDPAALA EADFIVVAVP TPVDAAHIPD FSPLVGASTT VGKHMKKGAT VIYESTVYPG
ATEEVCIPIL EKNSGMTWRH GFHVGYSPER VNPGDKERTI TRIVKVVSGD DAATLDKVAE
LYGSVITAGV HRASSIKVAE AAKVIENTQR DLNIALMNEL SLIFHRLGID TLEVLKAAGT
KWNFLPFRPG LVGGHCIGVD PYYLTHKADM LGYHPQVILA GRRINDGMGA YVAQETVKKM
IAGGVQVKGA KVNVLGLTFK ENCPDLRNSK VVDVIRELQS FGCEVHVHDP LGESKEAEHE
YGIGLTAWEE LPACDALVAA VSHAAYLDKP FAELTATLKK GGTFTDVKSA YDPATVEAAG
FALWRL
|
|---|
| |