| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0058 |
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| Symbol | |
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| ID | 3673257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 60870 |
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| End bp | 62672 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637708717 |
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| Product | ribonucleoside-diphosphate reductase alpha chain |
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| Protein accession | YP_313816 |
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| Protein GI | 74316076 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.614722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC ACGACCCTTT CCGCATGGAG ATCTCCCGCC ACATCTGGGA GACCCGCTAT
CGCTTCGCCG GCGAGCCCGA CATCCGCGCG AGCTGGCAAC GCGTCGCGCA GGCGGTCGCG
CAGGCCGAAG TCGACGCACG CGCGCTCTGG GCCGACCGCT TCTACGCCCT GCTCGACGAT
TTCCGCTTTC TGCCGGGCGG AAGAATTCTC GCCGGCGCCG GCAGCGGACA CCGCGTCACG
CTGTTCAACT GTTTCGTCAT GGGCGAGATC GCCGACGACA TCGAGGACAT CTTCGAGGCG
CTCAAGGAAG GCGCGCTGAC GATGCAGCAC GGTGGCGGCG TCGGCTACGA CTTCTCGACG
CTCCGTCCGG CCGGCACGAT CGCGCAGGCG ACCGGCACGA TCGCGTCGGG GCCGGTGTCG
TTCATGCACA TCTGGGACGC GATGTGCGCG ACCGTGCTGT CGACCGGCGC ACGGCGCGGC
GCGATGATGG CGACGCTACG CTGCGACCAT CCCGACATCG AGGCCTTCGT CGACGCCAAG
CGCGACCCTG CCGTGTTGCG GCACTTCAAT CTTTCGGTGC AGGTCAGCGA CGCGTTCATC
GCCGCCGTCG ACGCCGATGC CGACTGGCCG CTCGTCTTCC CGCTGCGCGA CGGCGAGCCG
GCCGACGGCG CGGTCGTCCG CCGGCACTGG ACCGGTTCGA CGACCGCCGT GCCCTGCCGC
GTCCTGCGCA CGGTGCGCGC CCGCGCGCTG TGGCAGCGGA TCCTGCGCGC GGCCTACGAC
ACGGCCGAGC CGGGCGTGCT GTTCGTCGAC ACGATCAACC GCGACAACAC GCTCGCCGGC
CGCGAGACGC TGACCACGAC CAATCCCTGC GGCGAGATTC CGCTTCCTGC CTATGGCGCG
TGCGATCTCG GCTCGCTCAA CCTGACCGCT TTCGTCGTCG CGCCCTTCGC CGCCGACGCG
CGCCTCGATC TCGCCGCGCT CGGCGACGCG GCGGCGCTTG CGGTGCGTTT CCTCGACGAC
GTCATCGACG TCTCGCGCTA CCCCTTGCAG GCGCAGGCGC GGGAGGCACG CTTCAAACGC
CGCATCGGCC TCGGTATCAC CGGGCTCGCC GACGCGCTCG TGTTGCTCGG TCTCGACTAC
GACAGCGAGC CCGCGCGCCA GCTCGCCGAG CGCGCGATGC GCACGGTGCG CGACGCGGCC
TACCGCGCGT CGATCGATCT CGCGCGCGAA AAAGGCGGCT TTCCCGCGCT CGAGCGCAGC
GCGTTTCTCG CCAGCGGCTT CGCCGGCCGC CTTCCGCCCG AGATCCGCGA CGGCATCGCC
AGGGACGGCA TCCGCAACAG CCATCTGCTC GCGATCGCGC CGGCCGGGAC GATCAGCCTC
CTGGCGAACA ATCTGTCCAG CGGAATCGAA CCGATCTTCG CGGCCGAGGC GTCGCGCCGC
ATCCTCCAGC CCGACGGCAG CTACCGCAGC CACGCCGTCA GCGACTACGC CTGCCTGCTC
TGGCGCGCGC ACGGCGGCGT CGGCCAGCCC CCCGCGCTGG TCGAGGCGCA ACAGCTCGAC
CCCGTTGCCC ATCTGGCGAT GCAGGCAGCC CTGCAGCCGG CCGTCGACAA CGCGATCTCG
AAGACGATCA ACGTCGCCGC CGACATCGCC TTCGCACGCT TCGAAGCGCT CTACCGCCAG
GCGCACGCGC TCGGCCTCAA GGGCTGCACC GTGTTCCGGC CGAATCCGGT CACGGGCGCG
ATCCTCGCCG AGCCCGAGAG CGAGCGCGTG CATTGCTGCG GGATCGAGCG TGAGGCCGAC
TGA
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| Protein sequence | MKTHDPFRME ISRHIWETRY RFAGEPDIRA SWQRVAQAVA QAEVDARALW ADRFYALLDD
FRFLPGGRIL AGAGSGHRVT LFNCFVMGEI ADDIEDIFEA LKEGALTMQH GGGVGYDFST
LRPAGTIAQA TGTIASGPVS FMHIWDAMCA TVLSTGARRG AMMATLRCDH PDIEAFVDAK
RDPAVLRHFN LSVQVSDAFI AAVDADADWP LVFPLRDGEP ADGAVVRRHW TGSTTAVPCR
VLRTVRARAL WQRILRAAYD TAEPGVLFVD TINRDNTLAG RETLTTTNPC GEIPLPAYGA
CDLGSLNLTA FVVAPFAADA RLDLAALGDA AALAVRFLDD VIDVSRYPLQ AQAREARFKR
RIGLGITGLA DALVLLGLDY DSEPARQLAE RAMRTVRDAA YRASIDLARE KGGFPALERS
AFLASGFAGR LPPEIRDGIA RDGIRNSHLL AIAPAGTISL LANNLSSGIE PIFAAEASRR
ILQPDGSYRS HAVSDYACLL WRAHGGVGQP PALVEAQQLD PVAHLAMQAA LQPAVDNAIS
KTINVAADIA FARFEALYRQ AHALGLKGCT VFRPNPVTGA ILAEPESERV HCCGIEREAD
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