Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Taci_1191 |
Symbol | |
ID | 8631039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
Kingdom | Bacteria |
Replicon accession | NC_013522 |
Strand | - |
Start bp | 1229977 |
End bp | 1234932 |
Gene Length | 4956 bp |
Protein Length | 1651 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | DNA-directed RNA polymerase, beta' subunit |
Protein accession | YP_003317705 |
Protein GI | 269792801 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0120631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTCACA AGGAGATAGT AGGCGTTCGG GTCAAGCTGT CCTCGCCGGA GAGGATAAGG GCCATATCCT GCGGCGAGGT GAAGAAGCCC GAGACAATAA ACTACAGGAC CCTCAGGCCC GAGAAGGACG GTCTCTTCTG CGAGAGGATC TTTGGTCCCA CCCGTAGCTT CGAGTGCGCC TGCGGCAAGT ACAAGCGCAG CGGCCCCAAG TTCAAGGGGG TGGTCTGCGA CCGTTGCGGC GTGGAGGTGA CCGACAACCG GGTCCGCCGG GAGCGGATGG GGCACATAGA GCTGGCGGCG CCGGTGGTGC ACATATGGTA CCTCAGGGGC ATCCCCAGCA GGCTGTCGCT GCTGATAGGC ACCTCCACCA AGGACCTGGA GCGGGTGGTC TACTTCGCCC CCAACAGGAG GCGGGAGGCG GCCTACAAGG TTGTCGTGGA GGGCCGCAGG ACCGACCTGG TGCGCCGGGG GGATGTGATC TCCGCTTCGG AGGAGCGGAT TCACCGGTTC TACGACTCCA AGTTCAAGGC GGAGGAGGCC TTCCGGGTTG TCCGGGTGGA CGAGATTCCC GTGGCGGAGG GGGACGTGAT AACCCTTCAC CAGCTGGCCC GCTATCGGGC GGAGTTCGGC GACGGGATCT TCGATACCGA GAGGGCCTAC CAGGTCCGGG GTGAGGAGGG GACTCGGGTG GTTCCCCAGT CCAAAGTCTC CCCGGAGGAC GACGCGTCCC CCATGGAGAT AAACGGCCAG GAGGCCTACG TGGTGGTGAG CGCCGTCCGG CTCCCCTTCT CCCGGAACGA CGTGCTCTCC AAGGGGGAGT GCGAGCTCTA CATGCAGAAG TTCCCCGGCC GGTTCCAGGC CCAGCCGGAG ACGATCACCC TGGAGGATCC GTGCCACATA GTGATCGAGA AGGGGGAGTC CCCCTTCGAG CGGGGTGACA TCATAACCGA GAGCGAGGAG TACCTGTGCT CCCGGTACGA CAAGTCCTTC ATGGCGGGCA TAGGGGCCGA GGGGGTCCTG GAGCTGCTCA AGCGGATCGA CCTGGACGAC CTGGCCACCA GCCTCCGGGA GGAGATAGCC GAGTCCTCGG GGCAGAAGAA GCGCAAGCTG GTGAAGCGTC TCCAGGTGGT GGAGGACTTC CGGAAGAGCG ACAGCCGGCC GGAGTGGATG ATCCTGTCGG TCCTGCCGGT GATCCCCCCG GATCTTAGGC CCATGGTCCA GTTGGACGGG GGGCGGTTCG CTACCTCGGA CCTGAACGAC CTGTACCGGA AGGTGATCAA CCGGAACAAT CGGCTCAAGA AGCTGATGGA GCTCCGGGCG CCGGAGATCA TAATCCGGAA CGAGAAGAGG ATGCTCCAGG AGTCGGTGGA CGCCCTGATA GACAACGGCC GCCGGGGCAA GCCGGTGCCC GGTGCGGGCG GTCGGCCCTT AAAGAGCCTA ACGGACCTGC TGCGGGGCAA GAAGGGCCGG TTCCGCCAGA ACCTGCTGGG CAAGCGGGTG GACTATTCGG GCCGTTCGGT CATAGTCATA GGGCCGAACC TTAAGATATA CCAGTGCGGT CTGCCCAAGC AGATGGCGCT GGAGCTGTTC AAGCCCTTCG TGGTGCACAA GCTGGTGGAG CGGGGGCTTG CGGCCAACGT GAAGAACGCC CGGCGCCTCA TCGAGCGGGG CAAGGACGAG GTCTGGGCCA TCCTGGAGGA GATAATAAAG GACCACCCGG TGTTGCTGAA CCGGGCCCCC ACCCTCCACA GGCTGGGCAT CCAGGCCTTT GAGCCGGTGT TGATCGAGGG CAAGGCCATA AGGCTACACC CCCTGGTCTG CACCGCCTTC AACGCGGACT TCGACGGGGA CCAGATGGCG GTTCACGTGC CCCTGTCGCT GGAGGCCCAG GCGGAGGCCC GGATACTGAT GCTCTCCTCC AACAACCTGC TCTCCCCCTC CAGCGGGAAG CCCATAGTGA CCCCCACCCA GGACATAATC CTTGGGGTCT ACTACCTTAC GGGGATGAAG CCGGATCTCA AGGGGGACGG CATGTACTTC AGGGACGAGG AGGACGTGTT GTCCGCCCTG GACCACGGGG TGGTGCACGT GAACGCCCGG GTGTACGTCC GAAACCGTCC CGAGTGGGGC CTTGGGGAGG ACAAGTGGCT GGAGACCAGC CCCGGTCGGG TGGTCTTCAA CTGCGCCATG CCTGAGAAGC TCCGGTTCAT AAACCGTCAA CTGGGCAAGA AGGACTTTGG CGCCCTGCTT GACCGGGCCT ACGATCTGGT GGGCCAGGCG GCCATGGTGG AGATGTTGGA TGGGATCAAG CAGCTGGGGT ACAAGTGGTC CACCAAGAGC GGCATAAGCC TCGGTATAGG GGACGTCATA GTGCCCCCCC AGAAGGAGTC CATAGTCAGG GAGACCATGG TCCACGAGGA GGAGCTGTCC GCCCAGTACG ACATGGGCAT CCTTACCGAG GATGAGTACA TGAGGCAGAA GGACGCCCTG TGGTCCGAGG CGGTCAAGAA CATAGTGGAC AAGATCGTGG ACAACATGGA CGTGGACAAC CCGCTGAGGA TAATGGTGGA CTCCGGGGCC AGGGGATCCA AGAGCCAGGT GGCCCAGATG GCGGGTATCC GGGGCCTGAT GGCGGACCCG TCGGGCAAGA TAATCGACTA CCCCATAGTG TCCAACTTCC GGGACGGGCT CAACATGTTG GAGTACTTCA TATCCACCCA CGGGGCCCGG AAGGGGTTGT CGGACACCGC CATGAGGACC GCCAAGTCCG GATATCTGAC CAGGCGTCTG GTGGACGTGG CACAGGACCT GATAATAACC GAGGAGGACT GCGGCACCGA CCGGGGGGTT GAGATGAGGC CCCTCAAGCA GGAGTCCAAG GTGGTGATCC CCCTGTCCGA GCGGGTGGCG GGTCGGGTGG CCTTGAGGGA CGTGATCTTG TCGGACGGCA CCTGTCTCGT CAGGGCGGGT CAGGAGATAG ACCAGGAGAC CGCCAAGGCG CTGGACCGGG CGGGGGTGGA GAGCGTGTGG GTGAGGAGTC CTCTCACCTG CGCTCTCAGG CACGGCATAT GCAGGACCTG CTACGGCAAG GACCTGGCGA CCCGTCACCG GGTGGCCATC GGCGAGGCGG TTGGAGTGGT GGCCGCCCAG TCCATAGGTG AGCCCGGCAC CCAGCTGACC ATGCGGACCT TCCACACCGG AGGGGTCCGG CAGTTCACCG GTGAGGACAT AACCCAGGGT CTGCCCCGGA TAGAGCAGCT CTTCGAGGTC CGGAAGCCCA AGAAGGCGGC GCTGATCGCC GAGCACGACG GCGTGGTGGT GGAGCGCCGG GAGGGGGAGG GCAAGAAGAA GCTGGTGGTG GCGGTCCCCC GGGAGGACGG GGGCGAGGAT CGGGTGGTCT ACACCCTGCC CGCCTCTCAG AACCTGTTGC CCGGCGTTGA GGAGGGGGCC CCTATCCACC GGGGTCAGGT GCTGACCGAG GGCTACATAG ATCCCCAGCA GCTGCTGGAG GTGGAGGGGC TGGAGGCGGT CCAGCGGTAC ATACTGGACG GAATCCAGGA CGTGTACCGT TCCCAGGGGG TCTCCATAAA CGACAAGCAC ATAGAGGTGA TACTCCGGAA GGTGGCGCCG GTGAACCGGG TCCGGGTCAT CGAGGAGGGG GACAGCTCCT TCGTGGCGGG TGAGCTGGTC TGGAAGGAGG ACCTGGAGGC GGAGAGCCGC CGGATATCGG AGCAGAACGC CAGGTTCCTG GAGGAGGCCT CGTTCCTCTG TGGCGCGGTG GTGAAGGACG CGGTGGGTTC CCTGGATGGG ACCGGCATAA CCCGGGACGA GGAGCTAACC ATGGATAAGC TGGGGCGGCT CCTGTCTCCC GGGGTTGGTG CCTCGGAGCT GATCTGCCAG GACCGGGAGG GGCTACTTAG GGTCATCGTG GGGGAGGCCT CCTTCAAGCG GGAGCTGGAG GGGCTTGAGC TCCTGAGCGA CCTGCCGGTG GCGGACGGGT GCGTCATATC CGCCGGCAGC AGGCTAACCG CCTCGGACGC CTCCCGGATA GTGGCCATGG GCCCCCAGCC GCTATTGGTG AAGGACCTCA AGGCCATGGA GGACATGGTG GGGGAGGTCT ACCTGGCGGA GGACGTGACG GTGGACGGTC GGGTTCTGAG CCTTAAGGAC CGGCTGTTCG ATCTGGAGGT CTTCCAGGAG CTCCGGTCCC TGCCGGTGGA GTCCGTGCGG ATCTGGAGGA ACCCGGAGCG GCTGGACCTC TGCAAGGACG TCTACGAGTA CCTGATAGGC AACTACCTGT CTCAGCGGGT GCTTAGGGTC ATAACCCGGG ATGGGGCGGT GACGGAGCCG CTGGACAACC GGATCAGCAT GGAGATAGCT GAGGGGATCC GGTCCGGGGA GGTAGAGGCC ATAGAGCTGG ACGGGAACAA CGTGGTCTCC CGGGAGAGGG TCCTCAAGGC GCTCCTCACC GAGAAGGTCT ACGGCAAGGT TCTGCTGGAG CCCGTCAGGG ACGTGGATGG GAACGTGGTG GTGCCAAGCG GCCGGGAGGT GAGCCACCAG GTCATGGATC AGATAGTGGC CGCGTGTCCC GGGGAGATGG TGGTCCGTCC GATCCTGGCC CAGGGTGAGC ATCGGAGGCT GATCCAGCGG ATCTCCTTCG TGAGGCGTCT TAGGGAGCTG CCCACCTGGA AGCCGGTGCT ACACGGGATC ACCAAGGCGG CGCTGGCCAC CGACAGCTTC CTTTCCGCCG CGTCGTTCCA GCAGACCGCC CAGGTTCTGG CCTCCGCGGC GGTGCGGGGA GAGGTGGACA ACCTGCTTGG ACTCAAGGAG AACGTGATAA TAGGTCTCCT GATCCCCTCC GGGACCGGGA TAGACAAGTA CCGGAAGGTC CAGGTGGTGG AGCCCAGGAC CGGGGAGGGT GGTAGCGACC TCTTCGAGTC CGGGGAGTCC GCTTGA
|
Protein sequence | MAHKEIVGVR VKLSSPERIR AISCGEVKKP ETINYRTLRP EKDGLFCERI FGPTRSFECA CGKYKRSGPK FKGVVCDRCG VEVTDNRVRR ERMGHIELAA PVVHIWYLRG IPSRLSLLIG TSTKDLERVV YFAPNRRREA AYKVVVEGRR TDLVRRGDVI SASEERIHRF YDSKFKAEEA FRVVRVDEIP VAEGDVITLH QLARYRAEFG DGIFDTERAY QVRGEEGTRV VPQSKVSPED DASPMEINGQ EAYVVVSAVR LPFSRNDVLS KGECELYMQK FPGRFQAQPE TITLEDPCHI VIEKGESPFE RGDIITESEE YLCSRYDKSF MAGIGAEGVL ELLKRIDLDD LATSLREEIA ESSGQKKRKL VKRLQVVEDF RKSDSRPEWM ILSVLPVIPP DLRPMVQLDG GRFATSDLND LYRKVINRNN RLKKLMELRA PEIIIRNEKR MLQESVDALI DNGRRGKPVP GAGGRPLKSL TDLLRGKKGR FRQNLLGKRV DYSGRSVIVI GPNLKIYQCG LPKQMALELF KPFVVHKLVE RGLAANVKNA RRLIERGKDE VWAILEEIIK DHPVLLNRAP TLHRLGIQAF EPVLIEGKAI RLHPLVCTAF NADFDGDQMA VHVPLSLEAQ AEARILMLSS NNLLSPSSGK PIVTPTQDII LGVYYLTGMK PDLKGDGMYF RDEEDVLSAL DHGVVHVNAR VYVRNRPEWG LGEDKWLETS PGRVVFNCAM PEKLRFINRQ LGKKDFGALL DRAYDLVGQA AMVEMLDGIK QLGYKWSTKS GISLGIGDVI VPPQKESIVR ETMVHEEELS AQYDMGILTE DEYMRQKDAL WSEAVKNIVD KIVDNMDVDN PLRIMVDSGA RGSKSQVAQM AGIRGLMADP SGKIIDYPIV SNFRDGLNML EYFISTHGAR KGLSDTAMRT AKSGYLTRRL VDVAQDLIIT EEDCGTDRGV EMRPLKQESK VVIPLSERVA GRVALRDVIL SDGTCLVRAG QEIDQETAKA LDRAGVESVW VRSPLTCALR HGICRTCYGK DLATRHRVAI GEAVGVVAAQ SIGEPGTQLT MRTFHTGGVR QFTGEDITQG LPRIEQLFEV RKPKKAALIA EHDGVVVERR EGEGKKKLVV AVPREDGGED RVVYTLPASQ NLLPGVEEGA PIHRGQVLTE GYIDPQQLLE VEGLEAVQRY ILDGIQDVYR SQGVSINDKH IEVILRKVAP VNRVRVIEEG DSSFVAGELV WKEDLEAESR RISEQNARFL EEASFLCGAV VKDAVGSLDG TGITRDEELT MDKLGRLLSP GVGASELICQ DREGLLRVIV GEASFKRELE GLELLSDLPV ADGCVISAGS RLTASDASRI VAMGPQPLLV KDLKAMEDMV GEVYLAEDVT VDGRVLSLKD RLFDLEVFQE LRSLPVESVR IWRNPERLDL CKDVYEYLIG NYLSQRVLRV ITRDGAVTEP LDNRISMEIA EGIRSGEVEA IELDGNNVVS RERVLKALLT EKVYGKVLLE PVRDVDGNVV VPSGREVSHQ VMDQIVAACP GEMVVRPILA QGEHRRLIQR ISFVRRLREL PTWKPVLHGI TKAALATDSF LSAASFQQTA QVLASAAVRG EVDNLLGLKE NVIIGLLIPS GTGIDKYRKV QVVEPRTGEG GSDLFESGES A
|
| |