| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_1152 |
|---|
| Symbol | |
|---|
| ID | 8631000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | - |
|---|
| Start bp | 1208321 |
|---|
| End bp | 1209160 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003317666 |
|---|
| Protein GI | 269792762 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00740539 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATAG AGGTTTCGGA GCTTCACCAT GTCTACCATA GGGGTACCCC CCTGGAGTAT
CACTCCTTGA GGGGGGTGTC CTTTGAACTG TCTCCCGGGG ACTGGGTCTC CGTTGTGGGC
CACACGGGGA GCGGCAAGTC CACCCTGGCC CAGCACCTGA ACGGTCTGAT CAGGCCCCAA
CGGGGCAGGG TGGTGGTGGA CGGGATATCC ACCGACGGAT CCCCCAAGGA GCTGAGGGAG
GTCCGCCGCC GGGTGGGGCT GGTTTTCCAG TTCCCGGAGC AGCAGCTCTT CGCGGACACG
GTTTACGACG AGGTGGCCTT CGGCCCCAGG AACTGGGGCT TCCCGGAAGA GGAGGTGCGC
CGTTTGGTGT TTGAGGCCCT GGAGGCGGTG GGGCTTCCTG AGTCCATGGT GGCTTCGAAC
CCCATGGGGC TATCGGGGGG GCAGAGGCGG AGGGTGGCCA TCGCGTCGGT GATCTCATCC
AACCCGGCGT ATCTGGTGCT GGACGAACCC ACCGCCGGAT TGGACGCCCG GGGGATAGAG
GAGCTGATAT CCCGCCTAAA CTCCCTTCGG TCCCGGGGGA TCGGGGTGTG TCACATAACC
CACGACCTGG AGATGGCTCT CGAACACAGC TCCAGGATCC TGGTGCTGTC CGACGGGGAG
GTGGCCCTCT GGGGGACCCC ATCGGAGGTG GCGGACCGGC TGGTCAGGGA TCCGATCCGG
GGGCTGGTGG TCCCCTCGGT GCTCCAGCTG GCCCTGGATC TCCGCCGCAG GGATCTTCCG
GTGCCCCTCA CCTGGGAGCC CGGGAGGCTG GCGGGGGCCA TCAAGGAGAT GAGAGGATGA
|
|---|
| Protein sequence | MSIEVSELHH VYHRGTPLEY HSLRGVSFEL SPGDWVSVVG HTGSGKSTLA QHLNGLIRPQ
RGRVVVDGIS TDGSPKELRE VRRRVGLVFQ FPEQQLFADT VYDEVAFGPR NWGFPEEEVR
RLVFEALEAV GLPESMVASN PMGLSGGQRR RVAIASVISS NPAYLVLDEP TAGLDARGIE
ELISRLNSLR SRGIGVCHIT HDLEMALEHS SRILVLSDGE VALWGTPSEV ADRLVRDPIR
GLVVPSVLQL ALDLRRRDLP VPLTWEPGRL AGAIKEMRG
|
|---|
| |