| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_0769 |
|---|
| Symbol | |
|---|
| ID | 8630587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | + |
|---|
| Start bp | 802979 |
|---|
| End bp | 804868 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | selenocysteine-specific translation elongation factor |
|---|
| Protein accession | YP_003317284 |
|---|
| Protein GI | 269792380 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.709604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTATC CCTTCGTCCT CGGAACCGGG GGGCACATAG ACCACGGGAA GACCACCCTG
GTGAAGGCCC TCACGGGGGT GGATTGCGAC CGCCTGCTTG AGGAGAAGCG GCGGGGGATA
ACCATAGAGC TGGGCTTTGC CCCCCTGAGG CTCGGGGACC GGGTGGTCAG CATAGTGGAC
GTGCCCGGGC ACGAGCGATT CATCCGCCAG ATGGTGGCCG GGGCCGCCGG GGTCGACGCG
GTTATGATGG TGGTGGCCGC CGACGAGGGG GTGATGCCCC AGACCAGGGA ACACCTGGAG
ATACTGGAGC TCTTGGGGGT CCGTAGGGGC ATAGTGGTGA TAACCAAGTG CGATGCGGTG
GAACCCGACC TGGTGGCCTT GGCCCAGGAG GACGTGAGAG AGGCCTTCCG GGGAACGTTC
CTCCAGGATG CGCCGGTGAT CCCCGTGAGC GCCGTTACCG GCCAGGGGTT GGAGGAGTTG
AAGGGGGCCA TAGGGGACCT GATCGACCGG CTATCCCCCA GGGACAGGGA GGGGGATCTC
TTTCTCCCCA TAGATAGGGC CTTCTCCATA TCCGGCTTCG GCACGGTGGT CACCGGCACC
GTATACCACG GATCGGTTAC AGAGGGGCAG GAGCTGGAGG TGCTGCCCTC CGGGCTCAGG
TCCAAGGTTA GATCCCTCCA GGTCCACGGT GAGAGGGTTC ATCGGGCGGT GGCGGGCCAG
CGGGTGGCGG TCAACGTCCC CTCTGTGGAC CTGGACTCGA TTCGGAGGGG GGACGTGTTG
GTGGCCCAGG GGGCCTGCCG TCCCACCGAT AGGCTCGACG TGTGGTTGTA CCTCCTCCCG
TCCTCCGCGG ACCCGCTGAA ACATTGGCAG AGGGTTAGGC TTCTCATGGG GACCTCGGAG
GTCATGGCCC GGATCATGTT GCTCGATAGG CCGAGGCTGG ATCCCGGCCT GGAGGCCCCA
GCCCAGCTGA TGCTGGAGGA GCCGGTGGCG GCGGTGGCCT CCCAGCGGTT CATCATCCGC
TTCTATAGCC CCTTAAGGAC CATAGGAGGG GGCCAGGTGT TGCTCCCCTA CCCCGACAGG
GTAAGGGGTA GGGCCGACAG GCTCTTGAGG GCCAAGGGGC TAGAGGCCAT GCGGGGGGCC
TCCTCCCGGG AGGAGAGGGT CAAGGCCTAC CTCCAGTTGG TTCCCATGGC CCCCCTGGAT
CGGGTAAAGA TGGATCTGGG GCTCGGTGAC GTGTCCGCTC TTCTGGACCG CCAGGGCCCC
CACTGGGTGA TAATTCAGTC CAAGCCCAAT CCATGGATCT TCGGCGCTGG TCACCATGGG
CACATGATCG AGACCGCGAG CCGACTGGTT GGGGATTTCC ACCGCAGGAA TCCATCGGAG
CGGGGCATGC CATTGGAGGA ACTGGCCAGG GCTTGCGGGA TGGAACAGGG GTTGCTCAGA
TCCTGGCTCG GCCACGAGTC CCTAGCGGGG CTCCTTGAGC TGGACGAAGG GAGGGTGAAG
GATCCATCGT TCGCCCGGGA CCTGGAGGGG CTCGATAGGC TTCTGCAGCG TCTTGAGGCC
CACCTGGATG AGAGGGGCTT CCTGCTCCCA GAACTTTGGG AGATGAGGGC CCACCTGGGG
GTTGACGACG AGACCTTCAA ACGGGTGGTG GCCTTGGCCA AGGAGAGGGG GCTGGGGGTC
ATCCTTCCCG GTGACCTCTT CCTGTCCTCC AAGCTAAGGG ACGCCCTCTG GAGGACCCTG
GCGGAGATGG GGGAGATAAC CGTGGCCACC GTGAGGGACA GGTTGGGGTT GAGCAGGAAG
TATGTGATGC CCATGCTGGA ACATCTGGAC TCCCTGGGCA TAACCCGGCG AGTCCAGGAC
AAGCGGGTGC TCCTCAAAAA GCCCGGATGA
|
|---|
| Protein sequence | MEYPFVLGTG GHIDHGKTTL VKALTGVDCD RLLEEKRRGI TIELGFAPLR LGDRVVSIVD
VPGHERFIRQ MVAGAAGVDA VMMVVAADEG VMPQTREHLE ILELLGVRRG IVVITKCDAV
EPDLVALAQE DVREAFRGTF LQDAPVIPVS AVTGQGLEEL KGAIGDLIDR LSPRDREGDL
FLPIDRAFSI SGFGTVVTGT VYHGSVTEGQ ELEVLPSGLR SKVRSLQVHG ERVHRAVAGQ
RVAVNVPSVD LDSIRRGDVL VAQGACRPTD RLDVWLYLLP SSADPLKHWQ RVRLLMGTSE
VMARIMLLDR PRLDPGLEAP AQLMLEEPVA AVASQRFIIR FYSPLRTIGG GQVLLPYPDR
VRGRADRLLR AKGLEAMRGA SSREERVKAY LQLVPMAPLD RVKMDLGLGD VSALLDRQGP
HWVIIQSKPN PWIFGAGHHG HMIETASRLV GDFHRRNPSE RGMPLEELAR ACGMEQGLLR
SWLGHESLAG LLELDEGRVK DPSFARDLEG LDRLLQRLEA HLDERGFLLP ELWEMRAHLG
VDDETFKRVV ALAKERGLGV ILPGDLFLSS KLRDALWRTL AEMGEITVAT VRDRLGLSRK
YVMPMLEHLD SLGITRRVQD KRVLLKKPG
|
|---|
| |