Gene Taci_0405 details

Gene Information

• Locus tag: Taci_0405
• ID: 8630215
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermanaerovibrio acidaminovorans DSM 6589
• Kingdom: Bacteria
• Replicon accession: NC_013522
• Strand: -
• Start bp: 425915
• End bp: 427891
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 68%
• Product: ABC transporter related protein
• Protein accession: YP_003316924
• Protein GI: 269792020

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.224406
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAAACC AACGACTGGA GGGATCGGAT CTGATAATCC TTGAGGGGGT CTCCCTTAGG 
TACCAGGACC GGGTGATCCT GGACGGGGCC GACTGGGTGG TGCCCGGCGG AGAGAAGGTG 
GCCCTGGTGG GGCCCAACGG TTGCGGTAAG ACCTCCCTCA TGAGGCTCAT CGCCGGGGAG 
GAGTCCCCCC ACGGGGGCAG CGTCAAGGTG AGGGGTGGGC GCATAGGCTA CCTTCCCCAG 
GACATAGCCC AGGTGGGCCC CGGGACGGTG ATGGAGTTCC TGACCGCCCG GTGCGGCCTG 
TCCCAGGCCA TGGAGGAGCT GAAGCGTCTG GAGGGTAGGA TGGGGGAAGC GGGATTGGAC 
CAGGGGGAGG CCCTGGCGCT GGCCCGGGAG CACGACCGGC TGCACGGCCT GATCCTTCGG 
CTGGAGGGCT ACTCCTTCGA GGCCCGGGCC CGGCGGGTTC TGTGGGGGCT GGGTTTCCGG 
GAGGGGGATC ACGAGAGGGA CTGCGGCCGC TTCTCCGGGG GGTGGAAGAT GAGGATCCTC 
TTGGCGTCCA TCCTCCTATC CGAGCCGGAC GTGATGCTGC TGGACGAGCC CACCAACCAC 
CTGGACACGG AGAGCATCGA GTGGCTGGAG GGGTATCTTA GGCAGTTCGA GGGCACCATG 
GTGGCGGTCT CCCACGACCG CCGGTTCATA AACGCCGTCA CCTCCGCGGT GGCGGAGATA 
AGGGGCGGAA GGGTTCGCAC CTACCGGGGG AGCTACGAGG ACTACCTGGC GGCCCGGAGG 
TCCGAGGAGG AGGCGGCGCG GCGCAGGGCC CGGGAGGTAC AGCGGATCCG GGAGGACACC 
ATGGAGTTCG TCCAGCGGTT CCGCTGCAAG GCCTCCAAGG CCTCCCAGGT GCAGAGCCGG 
CTGAAGCAGC TGGAGAGGCT GGAGGATGTT CAGCTGGAGG CCTCCCGGCG GGAGGTCCGG 
ATAAGGATCC CCAGCTGTCC CCGGGGACCG GAGCTGGTGT TGGAGGCCAA GGGGCTGGGG 
GTCCTCTACG ACCGGTGGAT CCTCCGGGAT CTGGATTTCG AGCTCCACCG GGGGGACCGG 
GTGGCCCTGG TGGGCTACAA CGGCTCGGGG AAGTCCACCC TGATGAGGCT CATGGCCTCC 
CAGCAGGTCC CCACCGAGGG GCAGGTCAGG CTCGGGCAGG GGGTGGTGAC GGGCTTCTTC 
TCCCAGGACA GCTCGGAGAA CCTGGACTAT CGGGGGACGG TGTTCAAGGA GGCCCGTTCC 
GGCTCGGACC AGCTCACGGA CCAGGAGGTA AAGTCGGTGC TGGGGGCCTT CCTGTTCGGC 
CCGGACCACT GGGACCTGCC GGTGGAGGTT CTCTCCGGGG GGGAGAAGTC CCGGCTGGCG 
CTGGCCAAGA TACTGATGTC CCCGGTGAAC CTTCTCCTGC TGGACGAGCC CACCAACCAC 
CTGGACGAGG ACACCCTGGA GATCTTCGCC GAGGCGCTGG ACGCCTATCA GGGGACGCTG 
GTGGTGGTGT CCCACCACCG AGACTTCCTG GACCGGATCT GCAACCGGGT ATTTGAGGTG 
CGGGATGGAT GCCTCCACCA GTACGTGGGG AACTACTCCC GGTTCATCGA GAGGCGCCGG 
GAGCAGGAGA GGGAGAGGGA GAGGGAGAGG GAGCGGGAGC TTGGGTCCTC CCAGGCCCCC 
CAGCGGAGGG AGGGGAGCTC CCTCCGGGAG GAGAGGCGTA GGGAGGCGGA GGAGAGGAAC 
CGGCTTTACA GGCTTCGCAA GGCGGTGGAG GACCGGATGG CCCCGGTGGA GCGGGCCATC 
GAGGAGGCGG AGGGCAGGAA GTCCCAGGTG GAGAGCATGC TCTGCGATCC GGAGGTGCTC 
TCCGACTCCG CCCTGGTTCA GGAGCTGATG GTGGAGCTGT CCGGCCTGAG CTCCTCCCTG 
GAAGGGCTGT ACGCCCGGTG GGAGGAGCTG GCCGCCGAGC TGGACTCCAT CGGCTAG 

 

Protein sequence

MANQRLEGSD LIILEGVSLR YQDRVILDGA DWVVPGGEKV ALVGPNGCGK TSLMRLIAGE 
ESPHGGSVKV RGGRIGYLPQ DIAQVGPGTV MEFLTARCGL SQAMEELKRL EGRMGEAGLD 
QGEALALARE HDRLHGLILR LEGYSFEARA RRVLWGLGFR EGDHERDCGR FSGGWKMRIL 
LASILLSEPD VMLLDEPTNH LDTESIEWLE GYLRQFEGTM VAVSHDRRFI NAVTSAVAEI 
RGGRVRTYRG SYEDYLAARR SEEEAARRRA REVQRIREDT MEFVQRFRCK ASKASQVQSR 
LKQLERLEDV QLEASRREVR IRIPSCPRGP ELVLEAKGLG VLYDRWILRD LDFELHRGDR 
VALVGYNGSG KSTLMRLMAS QQVPTEGQVR LGQGVVTGFF SQDSSENLDY RGTVFKEARS 
GSDQLTDQEV KSVLGAFLFG PDHWDLPVEV LSGGEKSRLA LAKILMSPVN LLLLDEPTNH 
LDEDTLEIFA EALDAYQGTL VVVSHHRDFL DRICNRVFEV RDGCLHQYVG NYSRFIERRR 
EQERERERER ERELGSSQAP QRREGSSLRE ERRREAEERN RLYRLRKAVE DRMAPVERAI 
EEAEGRKSQV ESMLCDPEVL SDSALVQELM VELSGLSSSL EGLYARWEEL AAELDSIG