| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1802 |
|---|
| Symbol | |
|---|
| ID | 6093253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1819365 |
|---|
| End bp | 1820453 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642488999 |
|---|
| Product | permease |
|---|
| Protein accession | YP_001739816 |
|---|
| Protein GI | 170289578 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCGACCT TCATCCTGAT CGCTCTGATC TTTGTGGCTT TCTATTTCGT TCCGTTCGGG
CATCCGATTG TCGATCAGAG TATTCTGAAC GGATTCTACC TGCTTCACGA ATACGCACGT
GAACACGTTC TTCTGTGTCT TGTTCCCGCA TTCTTCATCG CCGGAACGAT ATCAGTAATG
CTCAAAAAGG ACGCCGTTTT GAAACTCCTT GGTCCAAACG CAAAAAGGAT CATTTCTTAT
CCTGTCGCTG CGATTTCCGG TGGTATTCTG GCTGTCTGTT CCTGCACCAT TCTTCCGCTC
TTTGGAGGGA TCTACAAAAA AGGTGCGGGT ATAGGTCCTG CCACCACTTT CTTGTTTGCC
GGACCTGCCA TAAACATCGC TGCGATATTT CTGACAGCCC GAGTTCTTGG ATGGGATTTG
GGACTTGCCC GTCTCATTGC AACGATAACA GCAGCTGTCC TGATAGGCTT GATCATGGAA
ATGATCTATC AGGAAAGGGG AGAAGGTGGA CTCGCGTTCA CTTCCGATGA CGATCAATAC
GGCGTAAGAG GAATAATATT TTTCCTGATA CAGCTTGGAT TTCTGGTAAC GAGTTCTCTT
GGTATCAACC AGACCCTCAA ATATTCCCTG ATGACATTGC TCGGAATCTC CGCACTTTTC
ATGGCTTTGT TTGGTTTCAA AAGAGACACC GTTGAAAACT GGCTGTACGA AACCTGGGAC
TTCGCAAAGA AAATACTGCC ATATCTCTTC ATCGGTGTGT TCTTCGCAGG TGTTCTGACC
AGACTTCTGC CCCAGCAGGT GGTAACGGCA CTTCTTGGAA GCAACAGTTT CTTGTCAAAT
CTTGTAGCGT CCGTCATAGG AACTCTCATG TACTTTGCCA CTCTTACGGA AGTTCCAATA
GTTCAGGCTC TGAGAGAACT TGGAATGGCA AAGGGTCCAA CCCTTGCTCT TCTCATGGCC
GGTAATTCCC TCAGCCTGCC AAGCATGATC GTTATCACAA AGCTTCTTGG AAAGAAAAAG
GCCTTCACTT ACTTTGGCCT TGTGGTTGTT TTTTCCACTC TGTTTGGAAT GATATACGGA
GTAATTTAA
|
|---|
| Protein sequence | MATFILIALI FVAFYFVPFG HPIVDQSILN GFYLLHEYAR EHVLLCLVPA FFIAGTISVM
LKKDAVLKLL GPNAKRIISY PVAAISGGIL AVCSCTILPL FGGIYKKGAG IGPATTFLFA
GPAINIAAIF LTARVLGWDL GLARLIATIT AAVLIGLIME MIYQERGEGG LAFTSDDDQY
GVRGIIFFLI QLGFLVTSSL GINQTLKYSL MTLLGISALF MALFGFKRDT VENWLYETWD
FAKKILPYLF IGVFFAGVLT RLLPQQVVTA LLGSNSFLSN LVASVIGTLM YFATLTEVPI
VQALRELGMA KGPTLALLMA GNSLSLPSMI VITKLLGKKK AFTYFGLVVV FSTLFGMIYG
VI
|
|---|
| |