Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1732 |
Symbol | |
ID | 6093183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1749457 |
End bp | 1751346 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642488931 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_001739748 |
Protein GI | 170289510 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only |
COG ID | [COG0073] EMAP domain [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.210684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAATTTT ACATCACCAC CCCAATCTAC TACGTGAATT CTGAGCCTCA CATAGGAAGT GCCTACACCA CTATTGTAGC CGATATCATC GCTCGCTACA AACGTTTCAT GGGTTACGAT GTGTTCTTTC TCACGGGAAC GGACGAACAC GGCCAGAAGG TCCTGCAGGC AGCCCAGCAG GCTGGAAAGG ACCCGCAGGA ATTCTGTGAC GAACTGGCTG AAAAGTTCAA ACAGCTCTGG AAAGAACTGA AGATCACGAA CGATTATTTC ATCCGAACCA CAGACGAAAT GCACATGAAA ACCGTCCAGG AATTCGTTGC GAAGATGAAA GAAAACGGAG ACGTCTACAA GGGCATCTAC AAGGGATGGT ACTGTGTCCC CTGTGAGACG TTCTGGAACG AGGACGAGGT TATAAAGGAA GGAGAAGAAC GTTTCTGTCC GGAGTGTAAA AGACCCGTCA AATGGGTGGA GGAAGAGAAT TACTTCTTCA GACTTTCGAA ATACAGAGAT CCTCTCCTGA AGTACTACGA GGAGCATCCC GATTTTGTGG AACCGGACTT CAGAAGAAAC GAGATGCTGA AGATTCTCGA AGGTGGTCTC AAAGACCTGA GCATCACCAG GACGACCTTC AAATGGGGCG TTCCCATGAA GGACGATCCG GAACACGTGA TCTACGTGTG GGTGGACGCG CTCATAAATT ACATATCCGC TATAGGATAC GGCTGGAACG ATGAGATGTT CAATAAATGG TGGCCTGCAG ATTTGCATCT GATAGGAAAA GAAATAAACA GATTCCACTC CATCATATGG CCTGCGATGC TCATGTCGGT TGGACTCCCA CTTCCAAAAA AGGTGTTCGC ACACGGGTGG CTCACGGTGA ACGGCCAGAA GATCAGTAAG TCCCTCGGCA ACGCTATAGA CCCCAGATTC TTCGTGAAGA GATACGGCAA CGACGTGGTG AGGTATTACC TGATACGGGA TATCATGTTC GGAAAAGACG GCGATTTCTC GGAGGAAAGG CTCGTCCACA GATTGAATTC CGATCTCGCG AACGACTACG GAAATCTCCT TCACAGGATC ACGGCTATGA TAAAGAAGTA TTTCAACGGA AGACTTCCTT CTCCTTCTGC TCAGGAAGGG CTCGATAGCT GGCTGAAGGA GAGATTCTTC GAAACAAAAG ACGCTTACCA TGAACTCATG GATTCCTACC GGCTCACAGA AGCCCTGGAC AAGATATGGG AGTTCATAGC AGATGTGAAC AAGTACTTCA ACGACACGAA GCCCTGGATA CTTGGAAAAG AGGGAAATAT GGAAAGGCTC GGAACGGTGC TGTACAACTC ACTGGAGGCC GTGTTCAAGG TGGCTCTGAT GACACTCCCG GTGATGCCAG ACACCTCCAA AGAAGTGTTC AGGAGAGTGT CCTTTGAAGA AAAGCCTTCG AAGGAACATC TGGAAAACTG GGGAGTTCTG AAGTCTGGTT CCACAGTGGT CCACGGCGAA CCTCTCTTCA GAAAAATCGA CGCGAAAGAC TTCAAAAAGG TGGTGGAGAC GGTGTCGGTC GAACAGAACG TGATCACAAT AGATGATTTT TCCAAAGTAG ATCTCAGAAT TGCAAAGGTC CTCGAAGCGG AGAAGGTTCC AAATTCCAGA AAACTTCTCA GATTGATAAT CGATCTTGGA ACGGAAAAGA GACAGATAGT GGCGGGAATT GCAGAACACT ACAAACCCGA AGAACTCGTA GGAAAACTGA TCGTCGTTGT CGCTAATTTA AAACCCGCAA AACTCATGGG CATAGAGTCT CAGGGAATGC TCCTCGCCGC AAAGTCCGGC GATACCTTGA GACTTTTGAC TGTAGATGGA GAAATCACAC CAGGTGCGAA GGTGTCATGA
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Protein sequence | MKFYITTPIY YVNSEPHIGS AYTTIVADII ARYKRFMGYD VFFLTGTDEH GQKVLQAAQQ AGKDPQEFCD ELAEKFKQLW KELKITNDYF IRTTDEMHMK TVQEFVAKMK ENGDVYKGIY KGWYCVPCET FWNEDEVIKE GEERFCPECK RPVKWVEEEN YFFRLSKYRD PLLKYYEEHP DFVEPDFRRN EMLKILEGGL KDLSITRTTF KWGVPMKDDP EHVIYVWVDA LINYISAIGY GWNDEMFNKW WPADLHLIGK EINRFHSIIW PAMLMSVGLP LPKKVFAHGW LTVNGQKISK SLGNAIDPRF FVKRYGNDVV RYYLIRDIMF GKDGDFSEER LVHRLNSDLA NDYGNLLHRI TAMIKKYFNG RLPSPSAQEG LDSWLKERFF ETKDAYHELM DSYRLTEALD KIWEFIADVN KYFNDTKPWI LGKEGNMERL GTVLYNSLEA VFKVALMTLP VMPDTSKEVF RRVSFEEKPS KEHLENWGVL KSGSTVVHGE PLFRKIDAKD FKKVVETVSV EQNVITIDDF SKVDLRIAKV LEAEKVPNSR KLLRLIIDLG TEKRQIVAGI AEHYKPEELV GKLIVVVANL KPAKLMGIES QGMLLAAKSG DTLRLLTVDG EITPGAKVS
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