| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1411 |
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| Symbol | |
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| ID | 6092853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 1419792 |
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| End bp | 1420952 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642488613 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001739438 |
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| Protein GI | 170289200 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0507581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACATCT TGAGGAAAGT GGCAGAGATT CATGGGACAC CCACCTACGT GTACTTCGAG
GAAACACTGC GAAAAAGGTC ACGTCTTGTA AAAGAGGTCT TCGAGGGAGT GAATCTCCTT
CCAACGTTTG CCGTGAAGGC GAACAACAAT CCTGTTCTTT TGAGGATTCT AAGAGAAGAG
GGTTTCGGCA TGGACGTGGT GACAAAGGGG GAACTCCTCG CGGCTAAACT GGCAGGAGTT
CCTTCCCGTT CCATTGTATG GAACGGCAAC GGAAAGAGCA GGGATCAAAT GGAATACTTT
TTGAGAGAAG ATGTGAGGAT CATCAACGTG GATTCGTTCG AGGAGATGGA GATCTGGAAA
GAATTAAACC CAGAGGGAGT AGAGTATTTC ATCAGAGTGA ATCCGGAAGT CGACGCGAAG
ACACACCCTC ACATCTCCAC CGGCTTGAAA AAGCACAAGT TCGGAATACC ACTGGAAGAT
CTGGATTCGT TCATGGAAAG ATTCGGCTCA ATGAACATAA GGGGTCTCCA TGTTCACATA
GGATCCCAGA TAACCCGGGT TGAACCCTTT GTGGAAGCCT TCAATAAAGT TGTTCGGGCT
TCTGAAAGGT ATGGATTCGA AGAGATCAAC ATCGGCGGCG GCTGGGGAAT AAACTACAGC
GGAGAGGAAC TCGACCTGTC CAGCTACAGA GAAAAGGTTG TTCCTGCCTT GAAGAGATTC
AAAAGAGTCA TCATCGAAAT AGGAAGGTAC ATCGTAGCAC CTTCTGGGTA TCTGCTCCTC
AGAGTGGTGC TCGTCAAAAG AAGACATAAC AAGGCGTTCG TCGTAGTCGA TGGTGGGATG
AATGCCCTCA TAAGACCGGC GCTTTACTCT GCGTATCACA GGATCTTTGT GCTCGGAAAA
CAGGGTAAAG AGATGAGGGC AGATGTGGTT GGCCCACTGT GCGAGAGCGG TGACGTGATC
GCGTACGACC GGGAGCTTCC AGAGGTCGAA CCGGGTGACA TCATCGCTGT GGAAAACGCG
GGAGCTTACG GCTACACTAT GTCGAACAAC TACAACTCAA CCACACGTCC AGCTGAGGTA
CTCGTCGGGG AAAACGGAAG AATTTCTCTG ATAAGAAGAA GGGAAACGGA GATGGACATC
TTCAAAGACG TGGTGATGTG A
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| Protein sequence | MDILRKVAEI HGTPTYVYFE ETLRKRSRLV KEVFEGVNLL PTFAVKANNN PVLLRILREE
GFGMDVVTKG ELLAAKLAGV PSRSIVWNGN GKSRDQMEYF LREDVRIINV DSFEEMEIWK
ELNPEGVEYF IRVNPEVDAK THPHISTGLK KHKFGIPLED LDSFMERFGS MNIRGLHVHI
GSQITRVEPF VEAFNKVVRA SERYGFEEIN IGGGWGINYS GEELDLSSYR EKVVPALKRF
KRVIIEIGRY IVAPSGYLLL RVVLVKRRHN KAFVVVDGGM NALIRPALYS AYHRIFVLGK
QGKEMRADVV GPLCESGDVI AYDRELPEVE PGDIIAVENA GAYGYTMSNN YNSTTRPAEV
LVGENGRISL IRRRETEMDI FKDVVM
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