Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1394 |
Symbol | rplC |
ID | 6092836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1404950 |
End bp | 1405573 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642488596 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001739421 |
Protein GI | 170289183 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000462367 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATGA TAATTGGAAG AAAAATCGGT ATGACGAGAG TATTCGTTGG AAATGATTCC GTTCCCGTTA CAGTCATAAA GGCGGGGCCC TGTGTGGTTG TCCAGAAAAA AACCGTTGAG AAAGACGGAT ACAACGCTGT GCAGCTTGGA TTCGAGAAGG CTAAGAAGGT CAACAAACCT CTCGCAGGAC ACTTCAAAAA ATTCGGTGTG GAACCGATGA AAATACTCAG AGAGTTCAGA GTAGAAAATC CCGACGAGTA CGAACCCGGA CAGGTAATAA AGGTTGACGT GTTTGAAAAA GGTGAGTACG TGGACGTTAC TGGCTGGACA AAAGGAAGAG GATTCGCTGG TGCGATGAAA AGATGGGGAT TCAGCGGTGG ACCGAAGAGC CACGGTTCCA AATTCCATAG AGAACTCGGT TCTGTTGGTC AGCACACGGA ACCTGCCAAG ATATGGAAAG GTAAGAAAAT GCCCGGAAGA TATGGAAACG AGAGGGTAAC TGTCAGAAAT CTTCAAGTTG TGGATATCGA TCCTGAAAAC GACCTTTTAG TGGTCAAAGG TGGAGTCCCT GGAGCGAGGG GCGGGCTCGT TTTGATCAGG AGCGCCAAGG CCCCGAAAAA GTAA
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Protein sequence | MKMIIGRKIG MTRVFVGNDS VPVTVIKAGP CVVVQKKTVE KDGYNAVQLG FEKAKKVNKP LAGHFKKFGV EPMKILREFR VENPDEYEPG QVIKVDVFEK GEYVDVTGWT KGRGFAGAMK RWGFSGGPKS HGSKFHRELG SVGQHTEPAK IWKGKKMPGR YGNERVTVRN LQVVDIDPEN DLLVVKGGVP GARGGLVLIR SAKAPKK
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