Gene TRQ2_1364 details

Gene Information

• Locus tag: TRQ2_1364
• Symbol: rho
• ID: 6092806
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: -
• Start bp: 1389420
• End bp: 1390703
• Gene Length: 1284 bp
• Protein Length: 427 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 642488566
• Product: transcription termination factor Rho
• Protein accession: YP_001739391
• Protein GI: 170289153
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000237844
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACAGAGG AACAGAAAGC CATTAGCATA TCAGAGCTGG AATCCATGAA CATAAAACAG 
CTCTACGAGA TAGCAAAATC CCTGGGTATT CCTCGATACA CTTCTATGCG AAAAAGAGAC 
TTGATTTTTG CCATTTTGAA AGCCCAAACC GAATCCACCG GTTATTTTTT CGGTGAAGGT 
GTACTGGAAA TTCATCCTGA AGGTTTTGGT TTTTTGAGAA GGCTCGAGGA CAACCTTCTT 
CCAAGCAACG ATGATATATA CATATCCCCT TCTCAGATAA GGAAGTTCAA CCTGAACACG 
GGAGATATAA TTTCCGGGGT TATAAGGAAA CCGAAAGAAG GCGAAAAGTA CTTCGCCATG 
ATAAAAATCG AAGCGATAAA TTATCGACCA GTCGAAGCGG TCAACGACAG AGTAAACTTT 
GACAACTTGA CTCCGGATTA CCCCAGAGAA CGCTTCATCC TTGAAACCAA CCCAAAGATA 
TATTCCACCA GATTGATAGA TCTTTTCGCT CCTATTGGGA AGGGACAAAG AGGAATGATC 
GTGGCACCTC CAAAAGCCGG TAAAACGACT ATCCTCAAAG AAATAGCGAA CGGTATCGCT 
GAAAACCACC CGGATACCAT AAGAATAATC TTACTGATCG ATGAAAGACC GGAAGAGGTT 
ACGGATATAA AGGAGTCAAC GAATGCAATC GTCATAGCGG CTCCCTTTGA CATGCCCCCA 
GACAAACAGG TAAAGGTCGC CGAGCTCACC CTGGAAATGG CAAAGAGACT GGTGGAATTC 
AATTACGATG TTGTTATACT CCTTGACAGT CTGACAAGAC TTGCTCGAGT GTACAACATA 
GTAGTTCCTC CCAGCGGAAA ACTTCTAACG GGAGGTGTGG ATCCAGCCGC CCTTTACAAA 
CCCAAGAGAT TCTTTGGAGC GGCGAGAAAC ACCCGTGAAG GTGGAAGCCT CACGATCATC 
GCTACCGCTC TTGTGGAAAC GGGTTCGAAG ATGGACGAGG TCATATTCGA GGAATTCAAA 
GGAACAGGTA ACATGGAGCT GGTTCTCTCA AGACAGCTGG CGAACAAGAG AATCTTCCCA 
GCCATAAATC TTTTGCTTTC CGGAACAAGA AGGGAAGAGC TGTTGCTCGA TGAAGAGACT 
CTCAAGAAGG TTTGGCTCTT ACGAAGGATG CTCTCTGCAA TGACGGAAGA AGAAGGCTTG 
ACGCTCATAC TGAACAAACT TTCCGAAACT TCTTCAAACG AAGAATTTCT GAAATTGATA 
GACAAGGAAA AAGCAAGATA CTGA 

 

Protein sequence

MTEEQKAISI SELESMNIKQ LYEIAKSLGI PRYTSMRKRD LIFAILKAQT ESTGYFFGEG 
VLEIHPEGFG FLRRLEDNLL PSNDDIYISP SQIRKFNLNT GDIISGVIRK PKEGEKYFAM 
IKIEAINYRP VEAVNDRVNF DNLTPDYPRE RFILETNPKI YSTRLIDLFA PIGKGQRGMI 
VAPPKAGKTT ILKEIANGIA ENHPDTIRII LLIDERPEEV TDIKESTNAI VIAAPFDMPP 
DKQVKVAELT LEMAKRLVEF NYDVVILLDS LTRLARVYNI VVPPSGKLLT GGVDPAALYK 
PKRFFGAARN TREGGSLTII ATALVETGSK MDEVIFEEFK GTGNMELVLS RQLANKRIFP 
AINLLLSGTR REELLLDEET LKKVWLLRRM LSAMTEEEGL TLILNKLSET SSNEEFLKLI 
DKEKARY