Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1352 |
Symbol | |
ID | 6092794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1380799 |
End bp | 1381464 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642488554 |
Product | single-stranded nucleic acid binding R3H domain-containing protein |
Protein accession | YP_001739379 |
Protein GI | 170289141 |
COG category | [R] General function prediction only |
COG ID | [COG1847] Predicted RNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0197578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA TTGTGGAAAG GGCTCCTACA GTGGAGGAAG CGGTTGAAAA AGTGGTCAAA AAATACGGTC TCGGAGAAGG AGAGTACACG GTCAACGTGT TGGAAAAAGG ATTTCATGGA ATATTCGGCC TCTTTTCAAA AGAAGCGGTT GTCGAGGTGC AGATCACCAA AGCTTACTTT GAAAGAAAAT TGAAAGAATT TTTAACTGAG ATTTTGCAGG TGGTAGATTC AGAAGTCAAA ATAACTGTGA AATCTTCTGG AAGGAGTTTC TTTGTTGACG TGGAGAGTGA AAACGTAGGA AGGCTCATAG GTAAACACGG AAAAACCATG GGAGCACTTC AGCATATAGC GATGATCTTC CTCAACAGAT TGAGTGATAC GAAGCTGAAC GTGATTCTGG ATATGGGAGA TTACAGGGAA AAGCGGAAGA AATCTCTTGA GAAAATAGTG GAAGAGGCTG TCAAAAAGGC TATTTCCGAG AAGACCAAAG TAGTACTGGA TCCCATGTTT TCTTTTGAGA GGAAAATTGT TCACAAACTT GTGAGAAAAC ACAGAGGTGT GATAAGCTAC TCAGTCGGTG TAGAACCTTA CAGAAGAGTT GTGATAGAGT ATTCTGGAAC GAGGCGAGAG GGGAGAAGAA AACATGATAT TAAAGAAAGC ATATGA
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Protein sequence | MKKIVERAPT VEEAVEKVVK KYGLGEGEYT VNVLEKGFHG IFGLFSKEAV VEVQITKAYF ERKLKEFLTE ILQVVDSEVK ITVKSSGRSF FVDVESENVG RLIGKHGKTM GALQHIAMIF LNRLSDTKLN VILDMGDYRE KRKKSLEKIV EEAVKKAISE KTKVVLDPMF SFERKIVHKL VRKHRGVISY SVGVEPYRRV VIEYSGTRRE GRRKHDIKES I
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